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Detailed information on CNT30595664


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONOSAT000463, E-value = 1e-133

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100345Oryza meridionalisOryza rufipogon64.4710096.31352reverse complement

Expression of CNT30595664

Peptides detected in this lncRNA

>peptide 1 (49 aa)
GIFTTSCTFYQAQLIYSQHPTIITSNRKCGTKLYTHTERGQIKYILEET*

>peptide 2 (30 aa)
MNSKTQIISTISDNKQPPMHHIGIAHITMIL

Sequence

>CNT30595664
TTGGTATATTCACAACATCATGTACTTTTTACCAAGCTCAGCTGATATATTCACAACATCCTACAATAATTACCTCTAACAGAAAATGCGGTACAAAGTT
ATATACACATACAGAGCGTGGGCAAATAAAATACATTCTTGAAGAAACATAAACCATGTCCACTTCCATGATATAGACATCTCCATTCAATTCACCAAGG
CTTCCCAGGGTGAACAGCTCAGGCAATCAGCACAAAATTGCGACTGATAAAAGTCCGAGCCACACCAAGGGATACACAAGCTGTGATGGAGATACCTAGA
ACAAAACAGGAAGAGGGAGGGACCAAAGAAAAACTCCGAGGTCCCTCATTGTTACTCTAGCACAGCTATGACTCGAAACGCTCCCACGTGACGAAAGGGA
GGCGATCTTAAGGGCCGTGCTTAACAAATGCGAAAAAAAAAAACATCGCGACATGAACTCAAAAACACAAATTATCTCCACCATTTCAGACAATAAGCAA
CCCCCAATGCATCACATCGGCATAGCGCACATCACCATGATATTGC