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Detailed information on CNT30595656


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6EU94|PIP11_ORYSJ, E-value = 1e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640314Oryza meridionalisNymphaea colorata28.1427.8186.1794forward
CNT30531266Oryza meridionalisEucalyptus grandis23.0518.284.4277forward
CNT30631135Oryza meridionalisVigna unguiculata23.956.8186.2580forward
CNT30502187Oryza meridionalisNicotiana attenuata21.561.9888.8972forward
CNT30711465Oryza meridionalisGlycine max23.9517.1386.2580forward
CNT3044720Oryza meridionalisPrunus dulcis28.7414.5782.2996forward
CNT30589490Oryza meridionalisMusa acuminata29.0433.4586.697forward
CNT3085870Oryza meridionalisVigna radiata23.3517.7784.6278forward
CNT30552699Oryza meridionalisOryza glaberrima23.3519.8584.6278forward
CNT3061285Oryza meridionalisArabidopsis lyrata22.1610.1886.4974forward
CNT30613102Oryza meridionalisArabis alpina18.2623.4688.5261forward
CNT30227661Oryza meridionalisAnanas comosus25.1536.8491.6784forward
CNT30704968Oryza meridionalisPrunus avium28.1410.4284.0494forward
CNT30118191Oryza meridionalisCitrus clementina22.467.229275forward

Expression of CNT30595656

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MVIPGMVLVVDDGSAKAPGWVDASTGDGDGGQDEGANNLSTKTVTFGVATGNYIGTTAIAHVQTL

>peptide 2 (37 aa)
MMAAPRLLAGLMPVPVMGMVARMKVPTISAPRPSPLV*

Sequence

>CNT30595656
CCAATTGCTGATAATCTGATAATCAGCTTAGACCTCAATATAACAAAAAATGTAATGTGTTGACTAATATCTGATAATGTAAGAGGAACCAATTGCTGAG
AACGGCGAGTAGGTAAAAAGAGAAGAAAGGTTGCTCACATGGTCATTCCAGGCATGGTCCTTGTTGTAGATGATGGCAGCGCCAAGGCTCCTGGCTGGGT
TGATGCCAGTACCGGTGATGGGGATGGTGGCCAGGATGAAGGTGCCAACAATCTCAGCACCAAGACCGTCACCTTTGGTGTAGCCACTGGCAACTACATT
GGCACCACCGCCATTGCCCATGTACAGACCCTGC