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Detailed information on CNT30595610


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT002110, E-value = 4e-79

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371434Oryza meridionalisOryza glumipatula101.8710092.66218forward
CNT30104359Oryza meridionalisOryza rufipogon101.87100.4692.66218forward
CNT30578563Oryza meridionalisOryza barthii101.87100.4692.2218forward

Expression of CNT30595610

Peptides detected in this lncRNA

>peptide 1 (39 aa)
GLCACKLEVASSTPSKGRFVPLGKCHKKIIRFASRTKGG*

Sequence

>CNT30595610
TGGCCTCTGTGCATGCAAGCTTGAGGTAGCAAGTTCGACTCCTTCAAAAGGAAGATTTGTACCGTTGGGGAAGTGCCACAAGAAAATAATAAGATTTGCT
AGCAGGACAAAAGGAGGGTAAACTTGGGAAAAAAAAGGTTCGAAAGAAAAGAACAAAGAAGAGCTGCTTGAAGGAGTCGAACTTGCTACCTCAAGTTTGC
GTGCACATAGGCCA