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Detailed information on CNT30595599


BLAST search results

BLAST vs Swiss-Prot:
sp|O65857|GSTF1_ORYSJ, E-value = 1e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674534Oryza meridionalisSetaria viridis30.1722.1281.82121forward
CNT30133314Oryza meridionalisLolium perenne29.1815.5684.62117forward
CNT30678882Oryza meridionalisTriticum urartu34.1625.8583.94137forward
CNT30109709Oryza meridionalisOryza longistaminata25.9416.485.58104forward

Expression of CNT30595599

Peptides detected in this lncRNA

>peptide 1 (31 aa)
FDTRHKNDFIIFIRFGENLSARAKMSLLILM*

Sequence

>CNT30595599
TTTTGATACGAGGCACAAGAATGATTTTATTATTTTCATCCGTTTCGGCGAGAATCTTTCTGCAAGAGCAAAAATGTCCCTGCTAATCCTCATGTAGCCA
TATTTCGAAAAACAAAAACAAATCTAAAACTTGGTAGGCATATTTGCGCTAATCTTCTTGATAGATGGCCTCGACATCAGGCCCTCCCACCAAGCCTTGA
CGTGAGGGTACGCGTCAAACAGCGACGCATACGGGGTCGCCATGAAGTAGTACGTAAAGGGGAAGTGGTTCAGGTCCGCGAAGCTGAGGAAATCCCCGGC
GAGCACCTTCTTCAGCTTCTCCAGGCTCTCGTCGACCACCTGCTGGTTGGTCGGGACCCCGCGCATGATGGGGTAGATGATGCACTCGAACACGATGGGC
G