Detailed information on CNT30595586


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690016Oryza meridionalisOryza sativa98.938095.91464forward
CNT30552290Oryza meridionalisOryza glaberrima10067.3995.95469forward
CNT30369171Oryza meridionalisOryza glumipatula10079.2295.52469forward
CNT3099731Oryza meridionalisOryza rufipogon10047.1895.74469forward
CNT30603526Oryza meridionalisOryza punctata10080.1794.88469forward

Expression of CNT30595586

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MLRCIKEESPSFISNQWGCLLTLLNTSRRWQLLVKASK*

Sequence

>CNT30595586
GTGAGGTTTCTTTGGAGACAGGGGTCTTCACCTCTTCAGCATTTAAGCTCCACTGATCCATCATAAGTGGGCAACTTTGTGGCATCAAAGCATTTGGTGG
CGCAGTTGGTAACATTGATTGATTAATTCCTTTAGCAAGACTCTCACTTGGAGAGAATGCAGCTATTGCGGTGGGTACCTGAGCTTGCACGTTTGAAATA
GAAGTCGGAGATACATGTTGAGGTGCATCAAGGAAGAAAGCCCATCCTTCATCAGCAATCAATGGGGCTGCCTGTTGACTTTGCTGAACACTAGTCGTAG
GTGGCAGTTGTTGGTCAAAGCCAGCAAATAAATCTATTGACGGAGGGGTAGAGGAAATTGATGGTTCCTGCAAAGGCGACAGACTCACGAGATCTTGATG
GACAGGATGAGATGTAGAGGGTGCTTCGGCTTGAACAGGTGGTGAAGATGCCACGGCTTTCTGAACCAC