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Detailed information on CNT30595572


BLAST search results

BLAST vs Swiss-Prot:
sp|P30828|RBL_MAGLA, E-value = 3e-86

BLAST vs NONCODE:
NONORUT000578, E-value = 1e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Oryza meridionalisOryza sativa45.398.4298.2389forward
CNT30678279Oryza meridionalisSetaria viridis21.1221.194.48181forward
CNT30550200Oryza meridionalisIpomoea triloba31.7452.0195.96272forward
CNT30730480Oryza meridionalisCorchorus capsularis31.3921.4995.91269reverse complement
CNT30201083Oryza meridionalisPisum sativum43.5217.4786.86373forward
CNT30490123Oryza meridionalisOlea europaea31.7415.6295.96272forward
CNT30712870Oryza meridionalisGlycine max31.7416.3795.22272forward
CNT30157615Oryza meridionalisPistacia vera31.7437.0693.75272forward
CNT30179654Oryza meridionalisSecale cereale45.3947.7995.37389forward
CNT30292222Oryza meridionalisTriticum aestivum45.3925.8595.37389forward
CNT30221603Oryza meridionalisHordeum vulgare31.7422.5796.32272forward
CNT30592527Oryza meridionalisMusa acuminata20.7753.2995.51178forward
CNT30543279Oryza meridionalisBrassica napus31.3925.3395.54269forward
CNT30239038Oryza meridionalisBrassica oleracea43.5229.9186.86373forward
CNT30554212Oryza meridionalisOryza glaberrima45.3910.3198.46389forward
CNT30147386Oryza meridionalisMedicago truncatula31.7417.6495.22272forward
CNT30444217Oryza meridionalisAegilops tauschii38.8658.8394.29333forward
CNT30257373Oryza meridionalisAvena sativa45.3958.5896.14389forward
CNT3060115Oryza meridionalisArabidopsis lyrata43.5215.7388.74373forward
CNT30468144Oryza meridionalisSaccharum spontaneum23.927.2992.68205reverse complement
CNT302912Oryza meridionalisZea mays45.3948.5695.37389forward
CNT30605266Oryza meridionalisGossypium raimondii31.741395.96272forward
CNT30207637Oryza meridionalisHelianthus annuus31.7413.9194.85272forward
CNT30687498Oryza meridionalisTriticum urartu45.3928.6595.37389forward
CNT30360996Oryza meridionalisLactuca sativa31.7418.6495.96272forward
CNT30434643Oryza meridionalisPapaver somniferum30.5735.2293.51262forward
CNT3057903Oryza meridionalisAmborella trichopoda31.1611.1493.63267reverse complement
CNT30108930Oryza meridionalisOryza longistaminata31.7411.6297.43272forward
CNT3038420Oryza meridionalisCucumis melo31.2718.7797.01268forward
CNT30100001Oryza meridionalisOryza rufipogon23.6978.6898.52203forward
CNT30577866Oryza meridionalisOryza barthii24.9713.1496.73214reverse complement
CNT30115468Oryza meridionalisOryza nivara23.225.7696.98199reverse complement

Expression of CNT30595572

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MNHCLGRPYAYEFNDLRAPGGNFGKKAYWLSPWRCPGGPRFNSGLSH*

Sequence

>CNT30595572
CCTTCCCCCTTTTTTCCAAGAATGAATTCGCCCGACGCGACGAATCCTGCCCTCCTATCTTTCTTTCTCATTGAATGAACCACTGCCTGGGACGCCCCTA
TGCCTATGAATTCAATGATTTAAGGGCCCCAGGAGGAAACTTCGGAAAGAAAGCCTACTGGTTGTCCCCCTGGCGGTGCCCGGGTGGGCCTCGGTTCAAC
AGCGGCTTAAGCCATTAGGTGTAGGCGCTTTCCAGAGGTGGAAGATTTGCGTTCTTCCTATTTGACCGGAAACCGATCGATCTAGCCATGAGCAGGTTGA
AGAGAGCTCTAACAGGCCTTGGAGGAACGAACCCACGTATGCGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGACCAACCAAGATCAGATATA
GCTGGTTTTCCACGAAATCTATTTCAGTAGAGCGTATGATGTCGATGGCCCGAGGTAGAGCACTCAATGCGTTCCCCTTCTAACTTACCTACTACTGTAC
CAGCGTGGATATGATCTCCCCCAGACATACGCAATGCTTTAGCTAATACACGGAAATGCATACCATGATTTTTCTGTCTATCAATAACTGCGTGCATTGC
TCGGTGAATGTGAAGAAGTAGGTCGTTGTCGCGGCAATAATGAGCCAAACTAGTATTTGCAGTGAATCCCCCGGTTAAGTAGTCATGCATTACAATAGGA
ACCCCTAATTCCCTCGCAAATACAGCTCTCTTAATCATTTCTTCGCATGTACCTGCAGTCGCATTCAAGTAATGCCCCTTAATTTCATCGGTTTCGGCCT
GTGCTTTATAAATAGCTTCGGCACAAAAGACAAAACGGTCCCTCCAACGCATAAATG