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Detailed information on CNT30595521


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT005024, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30100359Oryza meridionalisOryza rufipogon91.1869.4895.29403forward

Expression of CNT30595521

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVLCHVVGSRCVRHHGVKFKAWARHLTVLGHISSMTRME

>peptide 2 (34 aa)
MVISCVPIGGECAQTELRTSLNVSSFRIEYNHMC*

Sequence

>CNT30595521
AGATGAATAAATGAAGTATTTGACAAATAAAATGATGGAAAACATGGATTTTAGGTTTGGGCCTCAAGTGGTGCACATATGGTGATTAGTTGTGTACCGA
TAGGGGGAGAGTGTGCCCAAACCGAGCTAAGGACTTCACTCAATGTCAGTTCATTTCGTATAGAGTACAACCACATGTGCTAGTATGGGATAGCCCAAGC
TTAGTAAATTATTTATGGTTTAGCCTTACATTCTGGTAGGCCGGTGTGTATGAGTTCGTATAATTCAGAGGAGCTTCCTATTTACCCCGAAGTGGTAGTT
TAGGTGACTAAGCGTGTACAATACAATGGTATTGTGCCACGTGGTGGGTTCCCGTTGTGTCCGCCACCACGGCGTTAAGTTTAAGGCATGGGCCCGCCAC
TTAACGGTTCTAGGTCATATTTCTAGTATGACTAGGATGGAG