Detailed information on CNT30595519


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690610Oryza meridionalisOryza sativa10024.4699.51204forward
CNT30185545Oryza meridionalisSecale cereale45.5945.3788.1793forward
CNT30455311Oryza meridionalisSaccharum spontaneum35.786.5293.1573reverse complement
CNT30353440Oryza meridionalisEragrostis tef53.438.3385.32109reverse complement
CNT30369233Oryza meridionalisOryza glumipatula10066.89100204forward
CNT3099654Oryza meridionalisOryza rufipogon10047.8999.51204forward
CNT30574824Oryza meridionalisOryza barthii10097.61100204forward
CNT30497582Oryza meridionalisDigitaria exilis10097.6189.71204forward
CNT30603436Oryza meridionalisOryza punctata10080.6396.57204forward
CNT30550503Oryza meridionalisOryza brachyantha10043.9794.12204forward

Expression of CNT30595519

Peptides detected in this lncRNA

>peptide 1 (31 aa)
LIMNLIDNMIWSCVQSSFPQPKKMSTSIYFV*

Sequence

>CNT30595519
CCTCATAATGAATTTGATTGATAATATGATCTGGTCGTGTGTCCAAAGTTCCTTTCCTCAACCAAAAAAAATGAGCACCTCTATCTATTTTGTGTAGTCC
TGCTAGCCTGAGGACACAGCCTCCTGCCTCAAGAACAACATTCTCTGCTTTTAGAAGGACATCAGTACGAGGGCTTCTGCCAATTGGCACAGATGGGCAA
TCCT