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Detailed information on CNT30595493


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30149113Oryza meridionalisBrachypodium distachyon10.4522.879275forward
CNT3099683Oryza meridionalisOryza rufipogon11.2840.510081reverse complement

Expression of CNT30595493

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MLTMPSSSPILAFNPVAPFKPQTRTSSITGPQSELWSSLLVL*

Sequence

>CNT30595493
TGGAGATCGGATCAACTCCTGAAATTTCTAATATATTGAAGGGATGATATTTGAACATTACAAGCTCTTGGCACACTAACCACCACACACTTCCCACAAT
GGCATGTTACTTTCTGAATCACAAATGAAAGCAACAGAAACAGCCATACATAGCTTCAGGTACCTTTAGCCTAAGCTCACAATCTCACATTACTCAACCT
CAGAAACTTCAAGCTTACTACCAAAACTAGTGGCCTCCTCATACTTACAGAAGAGGTTTATATATCTTTCGACCACAATCACTAAGAGATTCAGAATAAC
ATCAGACTGACAATGCTAACAATGCCAAGCAGCAGCCCAATACTTGCCTTCAACCCAGTAGCTCCATTCAAGCCCCAGACGCGCACATCATCGATCACTG
GCCCACAAAGCGAGCTGTGGTCGTCGCTTCTCGTGTTGTAATACACACTGTAGAACGCTACCCGCGTCCTCTCAGCTCGTGCTGTGAATGTCACATTCGC
AGCCTGGCTTGTGGCATTACCCATGGGCGAGTAGTGGAAGTTCTGGGCCTGGTCACCTGCGAATGCCATGACAGCCATTGGTGGCTGGCATGAATCCCCT
GCTGAGCCCAATGTGAATGTCAGGCTGTACTCTTTCTGAGGGGTTGTCTCGACCATCTGTGAGATGATGCCTTCCTTCCCTGATAGAAGCTCAATGGCGC
GCTTCCCTTGGGGAACGG