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Detailed information on CNT30595439


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FWS4|RK31_ARATH, E-value = 6e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523088Oryza meridionalisSetaria italica24.6547.4796.72122forward
CNT30437507Oryza meridionalisAegilops tauschii31.7253.491.72157forward
CNT30660960Oryza meridionalisTriticum dicoccoides38.3840.4391.58190forward
CNT30369365Oryza meridionalisOryza glumipatula100.466.2798.59497forward
CNT30100042Oryza meridionalisOryza rufipogon75.7647.2399.2375forward
CNT30574793Oryza meridionalisOryza barthii68.2856.2498.82338forward

Expression of CNT30595439

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MAAASSRARVALCSGFPLFRLLSVSGVCY

Sequence

>CNT30595439
TGAGAACACCGATCGAACACCTAGAGAGCAATGCGAATGCACGTGTAACGAGAGGCGTAAGCAAGAGTAGCTAATCCATTTTACGCAATTCCCAAAATCA
ACCAAGAGAAACCGCACCGGCGAGGCCGGCGGCGGAGGTGAGAGGCGAAGCGGGGGCTCAGCTGGCGCCGGCGGATCCCTCCTCCTCCGGGTCGAACTCC
GGGTCGCCGTCGGGGTGCATCTCCCTCCACTGGTCCTCGGGCCAGTACTCCTTGATGTGGCCCCACTTCTTGCGGAACTTCTCGATCTGGCTGTCCATGA
CGACCATCGCCGACGTGTCGCCGACGTAGTAGGGGTGGTTCCCCGACCACACGTCCACCGTGTACTCCGGCTTGGTTCCCCCCGAAGGAGGTGGAGAGGG
AGAGCGCCATGGCTGCTGCTTCCTCGCGCGCTCGCGTCGCACTTTGCTCCGGATTCCCCCTGTTTCGTCTCTTATCGGTTTCTGGTGTGTGTTAT