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Detailed information on CNT30595436


BLAST search results

BLAST vs Swiss-Prot:
sp|U5NDT8|SLS2_CATRO, E-value = 3e-45

BLAST vs NONCODE:
NONORUT000400, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690545Oryza meridionalisOryza sativa88.5240.5791.08370forward
CNT30115825Oryza meridionalisOryza nivara67.9493.7392.96284forward

Expression of CNT30595436

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MCLVFDSSNIPSKSSFVLSPSFIACILFPIIPLRID*

Sequence

>CNT30595436
ATCTGAACTCATGTGAACGAAATGGTATTATCAATTAAATCCTACAAGATACTGACAATTTTGAGGCGGCTCAGGCCATCATAATCTGGTTTATTCTTCC
CAAATAGTCCTAAGATCTCTTCCCTTGCACGATCCTGCCACTCGGGGTGCATGCTTAATAGCAGCATGGTCCATGTGAGAAGCACTGATGTTGTATCCGC
TCCTGCAAAGTAGAATAGCTTGCATTCCTCCATGATATCCTTGATTGTCAAGCCTTGGTTTGATTGACCATTCACTTCCATGTGTCTCGTGTTTGACTCA
AGCAATATACCAAGTAAATCATCTTTTGTGCTTTCACCTTCTTTCATAGCTTGCATTCTTTTCCCAATCATACCCCTCAGAATCGATTAGATCTCTTTAT
TCATTTGATGCATCTTCC