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Detailed information on CNT30595435


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000680, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3099867Oryza meridionalisOryza rufipogon41.0576.1299.51204forward

Expression of CNT30595435

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MHLCTRNYLTSIVIQQQRVHIWSHNDMPALDLAK*

Sequence

>CNT30595435
TGGGAAATGACATCTCGATAAAAGCTTTAGTGAGATCTCCATAAAAATCATAACATGACACATCAACAATACTACCATAAGTACAATCTAAGCTAAGTAT
TCATTTACTACAAGCAGCAAATCTTCTAAAGGCACACAATTTTACAACCGCTACAATACACATTAAGTACAATCTAAGCTAAGTATTCATTTACTACAAG
CAGCAAATCTTCTAAAGGCACACAATTTTACAACCGCTACAAATACAGTTAAAATGCACATTGCTAGCTATGCACACTAATCTGGCAAGTCATTGCAGGA
CTGTAGCTCACAGCTGACCAATGCACTTATGCACACGTAATTACCTAACCTCTATTGTCATTCAACAGCAGCGAGTCCACATCTGGAGTCACAACGACAT
GCCGGCTCTCGATCTCGCCAAGTAAACAACAATGCTTCTCTTTGGTGTTGATAGCAGCCACATGTTGTGCCATCCTACACTCTTCTCCTGGGTTCAC