Detailed information on CNT30595404


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000209, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619056Eragrostis curvulaSesamum indicum94.64100.1194.99919forward
CNT30585745Eragrostis curvulaMusa acuminata94.2378.4796.07915forward
CNT30311486Eragrostis curvulaCamelina sativa98.7692.0393.85959forward
CNT3018165Eragrostis curvulaZea mays95.8884.1897.21931forward
CNT30496898Eragrostis curvulaDigitaria exilis99.7953.5793.91969forward

Expression of CNT30595404

Peptides detected in this lncRNA

>peptide 1 (60 aa)
ACSSCSRGESGPPRAGRGTDRERLSRGPSPGVEQSTQNWYGQGESDCLIKTKHCDGPRGC*

>peptide 2 (48 aa)
LLELLTRRERATACRPGDGPGTALSGAFPGRRTVDSELVRTRGIRLFN*

>peptide 3 (55 aa)
MPLHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 4 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 5 (47 aa)
PARAAHAARAGHRVPAGGRTGNGSLGGLPRASNSRLRTGTDKGNPTV*

Sequence

>CNT30595404
GCCTGCTCGAGCTGCTCACGCGGCGAGAGCGGGCCACCGCGTGCCGGCCGGGGGACGGACCGGGAACGGCTCTCTCGGGGGCCTTCCCCGGGCGTCGAAC
AGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCCGCGGATGCTGACGCAATGTGATTTCTGC
CCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCTTCATCTA
ATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGGG
GAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGAATAAGTGGGACCCTTCGGGCGTCGGTGAAATACCACT
ACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAAGCGGGGCATTGCCCCTCTTTTTGGCTCCAAGGCCCGGCTTGCCGGGCCGATCCGGGCAGAAGA
CATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAAC
AAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGATCTTCGGAGTTTGAAGCTAGAG
GTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTG
TGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCG