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Detailed information on CNT30595262


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697243Eragrostis curvulaOryza sativa22.7112.7493.29164forward
CNT30676761Eragrostis curvulaSetaria viridis23.1351.794.61167forward
CNT30524157Eragrostis curvulaSetaria italica34.7620.5995.62251forward
CNT30314796Eragrostis curvulaCorylus avellana30.3331.8880.82219forward
CNT30223084Eragrostis curvulaHordeum vulgare21.1919.6288.24153forward
CNT30390900Eragrostis curvulaTriticum turgidum22.323.2788.82161forward
CNT30588905Eragrostis curvulaMusa acuminata18.5651.9483.58134forward
CNT30439071Eragrostis curvulaAegilops tauschii19.2541.6289.21139forward
CNT30255936Eragrostis curvulaAvena sativa20.7840.7689.33150forward
CNT30662744Eragrostis curvulaTriticum dicoccoides33.845.6990.16244forward
CNT30462400Eragrostis curvulaSaccharum spontaneum34.4918.388.35249forward
CNT30139084Eragrostis curvulaLolium perenne23.2720.0592.26168forward
CNT3017013Eragrostis curvulaZea mays23.5527.0792.94170forward
CNT30217689Eragrostis curvulaKalanchoe fedtschenkoi11.527.6789.1683forward
CNT3068263Eragrostis curvulaLeersia perrieri22.8521.6893.94165forward
CNT30684371Eragrostis curvulaTriticum urartu16.933.2492.62122forward
CNT30338292Eragrostis curvulaEragrostis tef34.6378.1294.4250forward
CNT30367530Eragrostis curvulaSorghum bicolor25.0753.2493.37181forward
CNT30371242Eragrostis curvulaOryza glumipatula22.7125.0493.29164forward
CNT30481517Eragrostis curvulaChara braunii9.1421.8587.8866forward
CNT30570222Eragrostis curvulaVitis vinifera24.9336.0781.11180forward
CNT30150970Eragrostis curvulaBrachypodium distachyon23.5570.5488.82170forward
CNT30104026Eragrostis curvulaOryza rufipogon33.3827.2992.95241forward
CNT30582099Eragrostis curvulaEchinochloa crusgalli22.8530.6189.09165forward
CNT30557232Eragrostis curvulaPanicum hallii33.135.9494.14239forward
CNT30334895Eragrostis curvulaCynara cardunculus12.3321.8783.1589forward

Expression of CNT30595262

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MISSWFSPAAMHSCGTTISHLLAVYGAVDQSHGRY*

>peptide 2 (42 aa)
MARSISLTVDTSRKRAPWIMDSLTTHALRYQQAGTYGVTEEG*

>peptide 3 (54 aa)
MPSLASAASPSEVYLPSCASEFALARSSSASCAAFTFSGCPPHVLRHVFCSARA*

Sequence

>CNT30595262
CACCACAAAGATAAAAAAAATAAACAGAATTTGATGGGTGCTACCCCATGCAAACTCACTCATACATAGATCTTAGTTCAAATGTATATATGTTCTCATA
AAACTTCAACATCTCATGACGCGTCCGTTTTTTCTACATAGCAACAAACAAGTGAAGACAAGGCTGATTATATATTCTAGGTCCATCGAGTGATGCACAT
GCAAAATAATACACAGGGTTTTTTTTTTTTTGCGAAGGAATACCCAGGTAATTAGCAAGTAATGATCTCGTCTTGGTTCTCTCCGGCAGCCATGCATTCA
TGTGGTACAACCATATCTCATCTGCTTGCAGTATATGGCGCGGTCGATCAGTCTCACGGTAGATACTAGTAGAAAGCGTGCACCATGGATAATGGACTCA
CTCACTACGCATGCTTTGCGATATCAGCAGGCAGGTACGTACGGTGTGACTGAAGAAGGGTAGTAATAATTAATTAGTAGCTGTAGTTCTTGACGAACAT
GCCCTCCTTGGCCTCTGCGGCCTCGCCGTCGGAGGTGTACTTGCCGAGCTGCGCGAGCGAGTTTGCCTTGGCGCGCAGCAGCAGCGCGTCCTGCGCCGCC
TTCACGTTCTCGGGCTGCCCTCCCCACGTCTTGAGGCATGTGTTCTGCAGCGCCCGCGCGTAGGAGAAAGACACGTGCCACGGGTTGGGCCCCTGGTTCA
TGGCGTTGAGGTTCTGCGTCGC