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Detailed information on CNT30595147


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000308, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678825Eragrostis curvulaSetaria viridis5293.5398.591705forward
CNT30283192Eragrostis curvulaChenopodium quinoa52.0681.0596.191707forward
CNT30193884Eragrostis curvulaSecale cereale51.3394.2998.461683forward
CNT30309180Eragrostis curvulaTriticum aestivum53.1971.6298.281744reverse complement
CNT30219940Eragrostis curvulaHordeum vulgare51.269.4797.441679reverse complement
CNT30400799Eragrostis curvulaTriticum turgidum53.1973.0698.051744reverse complement
CNT30663154Eragrostis curvulaTriticum dicoccoides51.4294.6196.981686reverse complement
CNT30143168Eragrostis curvulaLolium perenne52.7372.1998.731729forward
CNT3018062Eragrostis curvulaZea mays53.173.4998.391741reverse complement
CNT30585666Eragrostis curvulaEchinochloa crusgalli51.0294.6399.461673forward
CNT30557558Eragrostis curvulaPanicum hallii53.3155.6598.911748reverse complement

Expression of CNT30595147

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPTRDRRMLLIGLRRHLMRNQSLWVPGGVWSQG*

>peptide 2 (38 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAELSLRS*

>peptide 3 (44 aa)
MRPSRKLGFVARISSRITTVIRVARTIKQTITDLMSHSQFHSSN*

>peptide 4 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 5 (32 aa)
AGSTPGGALPSIPLSFSLATILPPEPKDFDFS*

>peptide 6 (29 aa)
RRLHAWWCPSVNSFKFQPCDHTPPGTQRL*

>peptide 7 (30 aa)
MMRRRHEGRAIRRVIMNHRISGQSPRQPFI*

>peptide 8 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 9 (44 aa)
MKNVAKCDTWCELQNPANHRVFERKLRPRPSGRGHVCLGVTPKDT

>peptide 10 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIGAYHGGDG*

>peptide 11 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 12 (56 aa)
MPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGSRRRRRFAAPDVARSPLNLII*

>peptide 13 (70 aa)
MMLSHANVSRAMACFEHSNFFKVTAPEARPGQLRPGAHRRQKGRVGRCSPKGGPADPAQGPTTSFLTATT*

Sequence

>CNT30595147
CCGCAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATA
AGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAAC
TTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATG
CCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGAT
GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAGGCACGACCCGGCCAATTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGTCGAGTC
GGTCGGTGCTCGCCGAAAGGCGGACCGGCCGACCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAA
TTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAACGCGCCCGGTAT
TGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG
AATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGC
ACGAGGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGGGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCGGAAGTT
GGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTT
CACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGTTATAGTTTGTTTGATGGT
ACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCAACTTCCGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGG
CTCTGCCCGCTGATCCGATGATTCATGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATG
GTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCA
GCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCGTTAGTGTCTGGTAATTGGAATGAGTACAATCTA
AATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGC
TCGTAGTTGGACCTTGGGCCGGGTCGGCCGGTCCGCCTTTCGGCGAGCACCGACCGACTCGACCCTTCTGCCGGCGATGCGCTCCTGGCCTTAATTGGCC
GGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGG
TCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAA
GACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCAT
AAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCA
AGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGCGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAG
CAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACG
AACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGTTATCCCTCCGCAGCTAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCACGGAAGTTTGAGGCAA
TAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTT
GGGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCC
TGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGGAGGCGGTTCGCCGCCCCCGACGTCGCG
AGAAGTCCATTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGTGACCCTGACCAAAA
CAGACCGTGAACGTGTCATCCATCCTGCCGGGTGACGGGGCTTGCCTCGGCTCCCGGCTTAGGCCCCAGACTTCCGTATGGAGGGTTGGAGCCGCAAAAG
AACCCACGGCGCCATCGGCGTCAAGGAACACTAATATTGCCTTGCTCAAGGTCTGTGACCGGCTTGCCGGAAACGTCTTGAGCAGCGATACCTATCGTAA
TCCACACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCAAAATGCGATACCTGGTGTGAATTGCAGAATCCCGCGAACCATC
GAGTTTTTGAACGCAAGTTGCGCCCGAGGCCTTCTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCCAAAAGACACTCC