Detailed information on CNT30594890


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 7e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30689963Eragrostis curvulaOryza sativa45.1623.6383.4494forward
CNT30501297Eragrostis curvulaCoffea canephora9.9626.2784.4109forward
CNT30552135Eragrostis curvulaOryza glaberrima9.631.5387.62105forward
CNT3014214Eragrostis curvulaZea mays14.3533.9185.35157forward
CNT30352211Eragrostis curvulaEragrostis tef24.0442.0187.45263forward
CNT30109318Eragrostis curvulaOryza longistaminata23.6710082.63259forward
CNT30580009Eragrostis curvulaEchinochloa crusgalli92.1476.1980.651008forward

Expression of CNT30594890

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVNPAYRGDLADKLFTIAFGVIAQHLDGNMGIAWE*

>peptide 2 (34 aa)
MGLHLDTPQPNNAQLLLQLMHVNNRRYITHLLPN*

>peptide 3 (35 aa)
MDNNSDLSLLRLDLHSFSLQPSPTVASQSCRHQIC*

>peptide 4 (36 aa)
HPPRCHPVRWTNNMKPPQDPAHLHRKRMASKAFPGH*

>peptide 5 (44 aa)
MPRAISSSLSQEKLFSEEKMYLSRTIGHVLVDKCPPHFLGAEPH*

>peptide 6 (56 aa)
MTCDCSDVRVGISQWTPEHLLHSRKLLDRIDCYPCFPVLVGKEGKYCQRAQHESAKY

>peptide 7 (58 aa)
MSDSSISMTSLIVGRSWDFIWIHHSPTTHSFFSSSCMSTIGDISPICCPTRWSYTQDG*

>peptide 8 (78 aa)
MIKKYIVRLDIKVQNLHVTPLMQVIDPPCNAQSNLIEFVPRETLLRREDVLIENHWACTRRQVPSSFPRSRTPLDAPR*

Sequence

>CNT30594890
CATCCTCCTCGATGTCATCCAGTTCGGTGGACAAATAATATGAAACCACCGCAGGACCCTGCTCATCTCCATCGCAAAAGAATGGCCTCGAAGGCATTTC
CAGGCCATTGATGTCAGACTCGAGCATTTCTATGACCTCGCTCATCGTCGGACGATCATGGGACTTCATCTGGATACACCACAGCCCAACAACGCACAGC
TTCTTCTCCAGCTCATGCATGTCAACAATAGGAGATATATCACCCATTTGCTGCCCAACTAGATGGTCATACACCCAGGATGGATAATAATTCTGACTTG
AGTTTGCTACGTTTGGATCTGCATTCCTTCTCCCTCCAGCCATCTCCAACAGTAGCATCCCAAAGCTGTAGACATCAGATTTGCTAGATACGACACCAAA
GCTCCTGGACACCATCTCTGGAGCTATATATCCGACGGTTCCCCTCATAGCACTAATTGGCACAAAACTGTTATCCCTTGGGAACAGTTTGGCAAGCCCA
AAATCAGCAACTTTCGGAACAAAGTTATGATCAAGAAGTATATTGTGCGGCTTGATATCAAAGTGCAGAATCTGCATGTCACACCCCTGATGCAGGTAAT
TGATCCCCCTTGCAATGCCCAGAGCAATCTCATCGAGTTTGTCCCAAGAGAAACTCTTCTCCGAAGAGAAGATGTACTTATCGAGAACCATTGGGCATGT
ACTCGTAGACAAGTGCCCTCCTCATTTCCTCGGAGCAGAACCCCACTAGACGCACCACGTTGACATGGTGAATCCTGCCTATCGTGGAGACCTCGCTGAT
AAACTCTTCACCATCGCATTTGGAGTTATTGCTCAGCATCTTGATGGCAACATGGGCATTGCCTGGGAATAGGACACCCTTGTACACTGAACCGTATCCT
CCTTGGCCGAGCTTCTCTCTGAAATGACTTGTGATTGCAGTGATGTCCGTGTAGGCATATCTCAGTGGACCCCCGAGCATTTGTTGCATTCGCGGAAACT
TCTCGACCGCATCGATTGTTATCCTTGTTTTCCAGTACTTGTGGGCAAGGAAGGTAAATATTGCCAGCGGGCCCAACACGAATCTGCAAAGTAC