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Detailed information on CNT30594668


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 5e-64

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522345Eragrostis curvulaSetaria italica87.8339.4784.8296forward
CNT30530404Eragrostis curvulaEucalyptus grandis82.278.0383.03277forward
CNT30318541Eragrostis curvulaCorylus avellana75.9654.5883.98256forward
CNT30703138Eragrostis curvulaQuercus lobata79.5351.1580.6268forward
CNT30500451Eragrostis curvulaCoffea canephora61.4219.482.13207forward
CNT30615836Eragrostis curvulaSesamum indicum66.4758.4980.8224forward
CNT30277485Eragrostis curvulaChenopodium quinoa45.417.9481.05153forward
CNT3021362Eragrostis curvulaCitrullus lanatus44.2122.8984.56149forward
CNT30727603Eragrostis curvulaCorchorus capsularis47.1832.1983.65159forward
CNT3068683Eragrostis curvulaQuercus suber79.5354.4781.34268forward
CNT30524728Eragrostis curvulaPhaseolus vulgaris73.5945.9380.24248forward
CNT30486152Eragrostis curvulaOlea europaea52.8219.6780.34178forward
CNT30504810Eragrostis curvulaNicotiana attenuata47.7724.7384.47161forward
CNT30636701Eragrostis curvulaCapsicum annuum48.6639.985.37164forward
CNT3091042Eragrostis curvulaSolanum tuberosum43.324082.88146forward
CNT30182233Eragrostis curvulaSecale cereale92.8850.3293.29313forward
CNT30289293Eragrostis curvulaTriticum aestivum38.2842.4382.95129forward
CNT30222279Eragrostis curvulaHordeum vulgare89.6110093.38302forward
CNT30590847Eragrostis curvulaMusa acuminata92.8868.4982.11313forward
CNT30539234Eragrostis curvulaBrassica napus74.1827.3280.8250forward
CNT30510868Eragrostis curvulaSolanum lycopersicum44.2171.6383.89149forward
CNT30143812Eragrostis curvulaMedicago truncatula48.0713.184.57162forward
CNT30244810Eragrostis curvulaAvena sativa92.8838.7492.65313forward
CNT30261302Eragrostis curvulaBrassica rapa68.2544.4980.87230forward
CNT30457014Eragrostis curvulaSaccharum spontaneum92.8840.9792.65313forward
CNT30134072Eragrostis curvulaLolium perenne92.8843.1192.01313forward
CNT3066796Eragrostis curvulaLeersia perrieri92.8880.4692.01313forward
CNT30653881Eragrostis curvulaRosa chinensis53.1216.7682.12179forward
CNT30718631Eragrostis curvulaMalus domestica golden77.1545.381.54260forward
CNT30338568Eragrostis curvulaEragrostis tef97.9270.6695.45330forward
CNT30477892Eragrostis curvulaArabidopsis halleri94.6629.8179.31319forward
CNT30363710Eragrostis curvulaSorghum bicolor45.125.8987.5152forward
CNT30595456Eragrostis curvulaOryza meridionalis94.0755.6192.43317forward
CNT30358465Eragrostis curvulaLactuca sativa49.5516.0181.44167forward
CNT30424172Eragrostis curvulaPapaver somniferum52.5225.3685.88177forward
CNT3054595Eragrostis curvulaAmborella trichopoda47.7777.7883.85161forward
CNT30105598Eragrostis curvulaOryza longistaminata52.8225.8384.83178forward
CNT30325711Eragrostis curvulaAsparagus officinalis68.2572.187.39230forward
CNT30574680Eragrostis curvulaOryza barthii51.0418.7884.88172forward
CNT30580107Eragrostis curvulaEchinochloa crusgalli92.8860.3192.97313forward
CNT30497454Eragrostis curvulaDigitaria exilis92.8884.1492.33313forward
CNT30115589Eragrostis curvulaOryza nivara51.0412.0584.88172forward
CNT30603529Eragrostis curvulaOryza punctata52.8223.2785.39178forward
CNT30174824Eragrostis curvulaVigna angularis88.4331.3782.55298forward
CNT30550386Eragrostis curvulaOryza brachyantha67.9583.2783.41229forward
CNT30336663Eragrostis curvulaCynara cardunculus50.4536.484.12170forward
CNT30723923Eragrostis curvulaLupinus angustifolius41.8468.7884.4141forward

Expression of CNT30594668

Peptides detected in this lncRNA

>peptide 1 (54 aa)
DVISGSTNRINMPPVRLLLWMLKWITVNFTCASQQEPCTNSLCQTQHIQGSHHI*

Sequence

>CNT30594668
AGGATGTTATATCAGGAAGTACCAATAGGATTAACATGCCCCCAGTAAGACTCCTTCTGTGGATGCTCAAGTGGATCACCGTAAACTTCACTTGTGCTAG
TCAACAAGAACCTTGCACCAATTCTCTTTGCCAGACCCAACATATTCAAGGTTCCCATCACATTTGATATGATTGTCTTGATCGGATTGTACTTGTAGTG
CACGGGCGACGCAGGGCAGGCGAGGTGGTAGATCCGGTCGACCTCGAGGAGAATGGGCTCGACGACGTCATGACGGAGCAGCTCGAACCTGGGGTTCCGG
AGGTGGTGCGCGACGTTCTCCTTCCTCCCGGTGAAGA