Detailed information on CNT30594623


BLAST search results

BLAST vs Swiss-Prot:
sp|P48438|GSTF_BRAOT, E-value = 8e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674975Eragrostis curvulaSetaria viridis67.2847.7884.15183forward
CNT30522744Eragrostis curvulaSetaria italica50.7411.9386.23138forward
CNT30472257Eragrostis curvulaSaccharum spontaneum39.3425.6684.11107forward
CNT30133314Eragrostis curvulaLolium perenne23.538.5189.0664forward
CNT30681876Eragrostis curvulaTriticum urartu43.3812.0987.29118forward
CNT30363688Eragrostis curvulaSorghum bicolor97.4342.1386.04265forward
CNT30369272Eragrostis curvulaOryza glumipatula86.7637.3483.47236forward
CNT30109709Eragrostis curvulaOryza longistaminata31.2513.4188.2485forward
CNT30497720Eragrostis curvulaDigitaria exilis69.1230.4785.11188forward

Expression of CNT30594623

Peptides detected in this lncRNA

>peptide 1 (40 aa)
SHFKQMASSVPQLSGQMASPSGHSTRPSHADTHRTLMHRV*

>peptide 2 (38 aa)
QPFQADGFISAATFWTDGLAIRPLHQAFTCGYASNTDA*

>peptide 3 (35 aa)
AISSRWLHQCRNFLDRWPRHQATPPGLHMRIRIEH*

Sequence

>CNT30594623
CAGCCATTTCAAGCAGATGGCTTCATCAGTGCCGCAACTTTCTGGACAGATGGCCTCGCCATCAGGCCACTCCACCAGGCCTTCACATGCGGATACGCAT
CGAACACTGATGCATAGGGTGTAGCAAACAAGCACAGGGTGACAGATGCATGGTTAAGGTCGGCAAGACTGATGTAGTCTCCAGCTAGGTACTTGCTCTT
GGAGAGACGTGCCTCGTACACCTCCAACACCTTCTTCAGCTTCTCAAGGTTCTCGTCGACGACCTTCTGGTC