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Detailed information on CNT30594443


BLAST search results

BLAST vs Swiss-Prot:
sp|P50378|EFTU_GONPE, E-value = 6e-15

BLAST vs NONCODE:
NONBNAT001751, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692364Eragrostis curvulaOryza sativa76.3178.6992.21886forward
CNT30521010Eragrostis curvulaSetaria italica76.2381.1991.3885forward
CNT30535563Eragrostis curvulaEucalyptus grandis68.2297.0685.73792forward
CNT30316757Eragrostis curvulaCorylus avellana61.2459.3587.76711forward
CNT30546799Eragrostis curvulaIpomoea triloba74.3370.2887.14863forward
CNT30518094Eragrostis curvulaJuglans regia71.8389.185.49834forward
CNT30618435Eragrostis curvulaSesamum indicum29.9770.8887.36348forward
CNT3021232Eragrostis curvulaCitrullus lanatus72.5268.0184.2842forward
CNT30727590Eragrostis curvulaCorchorus capsularis75.1964.4387.63873forward
CNT30380230Eragrostis curvulaManihot esculenta72.5234.7185.99842forward
CNT30194937Eragrostis curvulaPisum sativum75.6287.8983.94878forward
CNT30160120Eragrostis curvulaPistacia vera76.8371.7688.23892forward
CNT30287202Eragrostis curvulaTriticum aestivum40.3165.0990.17468forward
CNT30224163Eragrostis curvulaHordeum vulgare35.0660.6690.17407forward
CNT30387246Eragrostis curvulaTriticum turgidum76.3176.9887.58886forward
CNT3084148Eragrostis curvulaVigna radiata50.0435.6784.85581forward
CNT30541590Eragrostis curvulaBrassica napus75.7175.5886.12879forward
CNT30233993Eragrostis curvulaBrassica oleracea75.7181.8485.55879forward
CNT30173274Eragrostis curvulaTrifolium pratense71.9262.0885.99835forward
CNT30246955Eragrostis curvulaAvena sativa76.3150.290.52886forward
CNT30310418Eragrostis curvulaCamelina sativa75.5475.686.55877forward
CNT3059230Eragrostis curvulaArabidopsis lyrata75.7173.1386.69879forward
CNT3077042Eragrostis curvulaBrassica juncea75.7173.0186.12879forward
CNT30614135Eragrostis curvulaArabis alpina64.648.0886.27750forward
CNT30598511Eragrostis curvulaFraxinus excelsior40.7472.6686.26473forward
CNT30449495Eragrostis curvulaSaccharum spontaneum75.9772.4790.7882forward
CNT30132437Eragrostis curvulaLolium perenne76.3173.7187.36886forward
CNT3011166Eragrostis curvulaZea mays76.2362.5989.83885forward
CNT30127375Eragrostis curvulaCorymbia citriodora45.0593.7386.62523forward
CNT30685098Eragrostis curvulaTriticum urartu45.4835.9291.29528forward
CNT30350898Eragrostis curvulaEragrostis tef91.6595.5194.831064forward
CNT30480841Eragrostis curvulaArabidopsis halleri34.1963.9387.41397forward
CNT30368770Eragrostis curvulaSorghum bicolor61.76100.1490.38717forward
CNT30355521Eragrostis curvulaLactuca sativa58.9171.786.55684forward
CNT30151899Eragrostis curvulaPrunus persica27.8229.2887323forward
CNT30427598Eragrostis curvulaPapaver somniferum74.9463.686.09870forward
CNT30706337Eragrostis curvulaPrunus avium72.4472.1385.97841forward
CNT3052982Eragrostis curvulaAmborella trichopoda29.4626.1586.55342forward
CNT3037774Eragrostis curvulaCucumis melo40.4860.886.81470forward
CNT30580076Eragrostis curvulaEchinochloa crusgalli34.7130.4693.05403forward
CNT30496962Eragrostis curvulaDigitaria exilis76.2378.7490.96885forward
CNT30116111Eragrostis curvulaOryza nivara29.238.7492.63339forward
CNT30603820Eragrostis curvulaOryza punctata76.2382.0291.98885forward
CNT30724026Eragrostis curvulaLupinus angustifolius72.9558.8286.54847forward
CNT3050294Eragrostis curvulaCucumis sativus4177.6584.66476forward

Expression of CNT30594443

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MGLVGIILTIPASPFFRNLGSFSSSLPDRLSILVWSSANLTAMCEVWQSSTGA*

>peptide 2 (54 aa)
MVHLNRLDLSCQTAGTKGNNHTRLEDTSLHTAHGHSSNTTNLVHILKGETQGLV*

>peptide 3 (96 aa)
MMMTWEVKLAASLAGSSLEFEATLPRLISFTATFFTLKPTLSPGRASWRASWCISTDLTSVVRPLGPKVTTIPGLRTPVSTRPTGTVPIPPILYTS*

>peptide 4 (33 aa)
KLHWNCRLDKETNQAKPRGKRTYKNHNTRPQHK*

Sequence

>CNT30594443
AAGCTGCACTGGAACTGTCGGCTAGATAAGGAAACGAATCAAGCAAAACCGAGAGGAAAGAGAACATATAAAAACCATAATACTCGACCACAGCACAAAT
AAACGATAAACTGGACATCATTAAAGACCATAACAGGCGAATCATAGTTCAGTCTCAGCATCCACTGCTCAAATAACGACAGCATTTTAAAGACGGACAA
AGCACGAACTGAATGACACTAAACAAAACTTAAACAGGCACTACACCCCATAGAAGGGGGCCATTCATCAAACGCCTCATTTCTTCTTGGCAGCGGCCTT
GGTAACCTTGGCACCGGTGGGGTCCTTCTTCTCCACGCTCTTGATGACACCAACAGCAACAGTTTGCCTCATGTCCCGCACAGCGAACCGACCAAGAGGG
GGGTACTGAGAGAAGGTCTCAACAACCATGGGCTTGGTGGGAATCATCTTAACCATACCAGCATCACCGTTCTTCAGGAACTTGGGCTCCTTCTCAAGCT
CCTTGCCAGATCGTCTGTCGATCTTGGTCTGGAGCTCAGCAAACTTGACAGCAATGTGCGAGGTGTGGCAGTCAAGCACTGGGGCATAGCCATTGCCGAT
CTGACCAGGGGTGGTTCATGATGATGACCTGGGAGGTGAAGCTGGCCGCCTCCTTGGCAGGGTCATCCTTGGAGTTTGAGGCAACGTTACCACGCTTGAT
ATCCTTCACAGCAACATTCTTCACGTTGAAGCCCACATTGTCACCAGGAAGAGCCTCCTGGAGAGCCTCATGGTGCATCTCAACAGACTTGACCTCAGTT
GTCAGACCGCTGGGACCAAAGGTAACAACCATACCAGGCTTGAGGACACCAGTCTCCACACGGCCCACGGGCACAGTTCCAATACCACCAATCTTGTACA
CATCCTGAAGGGGGAGACGCAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCCAGCAGAGTGGGGCCCTTGTACCAGTCAAG
GTTGGTGGACCTCTCAATCATGTTGTCACCCTCGAAACCAGAGATGGGCACGAAGGGGATCTTGTCAGGGTTGTAGCCGACCTTCTTCAGGTAGGAAGAG
ACTTCCTTCACGATCTCTTCATAACGGGCCTTCGAGTACTTGGGAGTGGTGGCATCCATCT