Detailed information on CNT30594407


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41803|EF1A_MAIZE, E-value = 7e-63

BLAST vs NONCODE:
NONMEST004097, E-value = 4e-89

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672466Eragrostis curvulaSetaria viridis99.378.7795.74282forward
CNT30520930Eragrostis curvulaSetaria italica61.2763.7495.4174forward
CNT30378189Eragrostis curvulaArabidopsis thaliana96.1366.191.94273forward
CNT30727589Eragrostis curvulaCorchorus capsularis99.382.9488.65282forward
CNT30195181Eragrostis curvulaPisum sativum99.359.4988.3282forward
CNT30637620Eragrostis curvulaCapsicum annuum98.5914.5889.29280forward
CNT30224124Eragrostis curvulaHordeum vulgare99.394.9595.39282forward
CNT30590647Eragrostis curvulaMusa acuminata51.0646.4790.34145forward
CNT30509848Eragrostis curvulaSolanum lycopersicum80.9910090230forward
CNT30137210Eragrostis curvulaLolium perenne20.076.3191.2357reverse complement
CNT30625732Eragrostis curvulaDaucus carota48.9464.9587.05139forward
CNT30689637Eragrostis curvulaTriticum urartu99.328.8994.68282forward
CNT30721628Eragrostis curvulaTriticum spelta62.3253.4796.61177forward
CNT30368333Eragrostis curvulaSorghum bicolor68.6672.4995.9195forward
CNT30570869Eragrostis curvulaVitis vinifera10085.2988.03284forward
CNT3031228Eragrostis curvulaTheobroma cacao39.0844.7690.09111forward
CNT30323623Eragrostis curvulaAsparagus officinalis55.9950.9684.91159forward
CNT30101083Eragrostis curvulaOryza rufipogon96.1351.1295.6273forward
CNT30116334Eragrostis curvulaOryza nivara86.2740.1695.51245forward
CNT30726347Eragrostis curvulaLupinus angustifolius93.6655.7788.72266forward

Expression of CNT30594407

Peptides detected in this lncRNA

>peptide 1 (68 aa)
LLQQQIICFTPRVKARRACSRVWPSLEIPASKPPVVESMISTAQSAWEVPVIMFLMKSRCPGASMTVQ*

>peptide 2 (93 aa)
LVAAANHLLHSKSESKEGVLTGLAILGDTSLKTTSGGVNDKYSTVSLGGTRDHVLDEVTVSRGINDSAVVLGGLELPQSNIDGDTSLTLGLELV

Sequence

>CNT30594407
CTTGTTGCAGCAGCAAATCATCTGCTTCACTCCAAGAGTGAAAGCAAGGAGGGCGTGCTCACGGGTCTGGCCATCCTTGGAGATACCAGCCTCAAAACCA
CCAGTGGTGGAGTCAATGATAAGTACAGCACAGTCAGCCTGGGAGGTACCCGTGATCATGTTCTTGATGAAGTCACGGTGTCCAGGGGCATCAATGACAG
TGCAGTAGTACTTGGTGGTCTCGAACTTCCACAGAGCAATATCGATGGTGATACCTCTCTCACGCTCGGCCTTGAGCTTGTCCA