Detailed information on CNT30594390


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41803|EF1A_MAIZE, E-value = 7e-63

BLAST vs NONCODE:
NONMEST004097, E-value = 6e-94

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546688Eragrostis curvulaIpomoea triloba99.365.5888.3282forward
CNT30160107Eragrostis curvulaPistacia vera99.363.0989.72282forward
CNT3093993Eragrostis curvulaSolanum tuberosum99.354.0288.3282forward
CNT30608684Eragrostis curvulaGossypium raimondii80.2854.1689.91228forward
CNT30338600Eragrostis curvulaEragrostis tef97.1857.597.1276forward
CNT30704438Eragrostis curvulaPrunus avium44.3752.2889.68126forward
CNT30644460Eragrostis curvulaCannabis sativa71.8368.2389.71204forward
CNT30120974Eragrostis curvulaCitrus clementina99.346.5390.43282forward

Expression of CNT30594390

Peptides detected in this lncRNA

>peptide 1 (68 aa)
LLQQQIICFTPSVKARRACSRVWPSLEIPASKPPVVESMIRTAQSAWEVPVIMFLMKSRCPGASMTVQ*

>peptide 2 (93 aa)
LVAAANHLLHTKCESKESMLTCLAILGDTSLKTTSGGVDDKDGTVSLGGTRDHVLDEVTVSRGINDSAVVLGGLELPQSNIDGDTSLTLGLELV

Sequence

>CNT30594390
CTTGTTGCAGCAGCAAATCATCTGCTTCACACCAAGTGTGAAAGCAAGGAGAGCATGCTCACGTGTCTGGCCATCCTTGGAGATACCAGCCTCAAAACCA
CCAGTGGTGGAGTCGATGATAAGGACGGCACAGTCAGCCTGGGAGGTACCCGTGATCATGTTCTTGATGAAGTCACGGTGTCCAGGGGCATCAATGACAG
TGCAGTAGTACTTGGTGGTCTCGAACTTCCACAGAGCAATATCGATGGTGATACCTCTCTCACGCTCGGCCTTGAGCTTGTCCA