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Detailed information on CNT30594303


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y052|CALM_EUPCH, E-value = 4e-84

BLAST vs NONCODE:
NONSLYT003545, E-value = 2e-83

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693832Eragrostis curvulaOryza sativa29.179.194.65187forward
CNT30672655Eragrostis curvulaSetaria viridis50.8661.5193.56326forward
CNT30545709Eragrostis curvulaIpomoea triloba48.2133.0885.76309forward
CNT30373447Eragrostis curvulaArabidopsis thaliana29.6431.288.42190forward
CNT30617519Eragrostis curvulaSesamum indicum58.3518.6284.76374forward
CNT30379145Eragrostis curvulaManihot esculenta41.3458.8987.17265forward
CNT30487677Eragrostis curvulaOlea europaea22.1539.1287.32142forward
CNT30504265Eragrostis curvulaNicotiana attenuata21.6845.5783.45139forward
CNT30156599Eragrostis curvulaPistacia vera58.0349.3486.83372forward
CNT3097357Eragrostis curvulaSolanum tuberosum58.0318.684.95372forward
CNT30125031Eragrostis curvulaPhyscomitrium patens32.6129.1979.9209forward
CNT30387589Eragrostis curvulaTriticum turgidum34.0110.4888.99218forward
CNT30560106Eragrostis curvulaActinidia chinensis58.0369.9286.29372forward
CNT30586817Eragrostis curvulaMusa acuminata30.2719.4486.08194forward
CNT3085845Eragrostis curvulaVigna radiata37.4418.3287.5240forward
CNT30234205Eragrostis curvulaBrassica oleracea30.2737.3889.69194forward
CNT30553673Eragrostis curvulaOryza glaberrima55.3846.5392.96355forward
CNT30147448Eragrostis curvulaMedicago truncatula28.5535.9584.7183forward
CNT30248464Eragrostis curvulaAvena sativa29.1730.7189.3187forward
CNT30311950Eragrostis curvulaCamelina sativa51.0145.3588.38327forward
CNT3073928Eragrostis curvulaBrassica juncea30.2744.2991.24194forward
CNT30613842Eragrostis curvulaArabis alpina15.7623.7683.17101reverse complement
CNT3011614Eragrostis curvulaZea mays62.453.2684.75400forward
CNT30607166Eragrostis curvulaGossypium raimondii26.3746.386.39169forward
CNT30231884Eragrostis curvulaAnanas comosus50.8630.9387.12326forward
CNT30216184Eragrostis curvulaKalanchoe fedtschenkoi31.0540.9588.94199forward
CNT30204543Eragrostis curvulaHelianthus annuus18.5654.3484.87119forward
CNT30625935Eragrostis curvulaDaucus carota22.6210.283.45145forward
CNT30346128Eragrostis curvulaEragrostis tef94.23100.8391.72604forward
CNT30479425Eragrostis curvulaArabidopsis halleri58.3563.8286.1374forward
CNT30367748Eragrostis curvulaSorghum bicolor37.661.9591.29241forward
CNT30621990Eragrostis curvulaCajanus cajan26.2125.3886.9168forward
CNT30596276Eragrostis curvulaOryza meridionalis26.6830.795.32171forward
CNT30483255Eragrostis curvulaChara braunii21.5312.4185.51138forward
CNT30104901Eragrostis curvulaOryza longistaminata29.1711.5595.19187forward
CNT3026117Eragrostis curvulaPopulus trichocarpa17.9426.8186.09115forward
CNT30120491Eragrostis curvulaCitrus clementina37.1367.0486.97238forward
CNT3037982Eragrostis curvulaCucumis melo40.4146.9285.71259forward
CNT30332036Eragrostis curvulaDioscorea rotundata29.6460.3288.95190forward
CNT30149356Eragrostis curvulaBrachypodium distachyon36.9710.1593.67237forward
CNT30101815Eragrostis curvulaOryza rufipogon36.3542.9993.99233forward
CNT30576402Eragrostis curvulaOryza barthii50.2342.7692.55322forward
CNT30496859Eragrostis curvulaDigitaria exilis60.3763.1387.6387forward
CNT30116198Eragrostis curvulaOryza nivara33.0716.0686.79212forward
CNT30175579Eragrostis curvulaVigna angularis35.4139.2187.22227forward
CNT30335796Eragrostis curvulaCynara cardunculus29.9548.2485.42192forward
CNT3039763Eragrostis curvulaMarchantia polymorpha31.3632.7981.09201forward

Expression of CNT30594303

Peptides detected in this lncRNA

>peptide 1 (59 aa)
NLTGDDRKDLHKRYKTQESMSLTNPKCKITSQSKETRYLMSLPMTTPPNPITTEHYPPA*

>peptide 2 (68 aa)
MTWRSSAAEMKPFWSLSKTRKASLSSSSESVSFIFLAIRFRNSGKSMVPLPSASTSLIMSWSSASVGF*

>peptide 3 (52 aa)
MGHSSLSHHDLDKLLVVDLAIAINISLTDHLINFLISQLLPEVGHDMAKLSS*

Sequence

>CNT30594303
CAAATTTGACAGGAGATGATAGAAAAGATTTGCATAAAAGATACAAAACACAGGAAAGCATGAGCTTAACAAATCCTAAATGCAAGATAACATCACAATC
AAAAGAAACCAGGTATCTGATGTCGCTTCCCATGACTACACCACCTAACCCGATCACTACTGAACATTACCCACCTGCATAATGTACTCAAAGGACATCA
CAAAGTACAACTGGTATGCCTGATAATTAGGTTTGCTTCAGAGGAACTTTATTTCATGGGACACTCCTCACTTAGCCATCATGACCTTGACAAACTCCTC
GTAGTTGATCTGGCCATCGCCATCAACATCAGCCTCACGGATCATCTCATCAACTTCCTCATCAGTCAGCTTCTCCCCGAGGTTGGTCATGACATGGCGA
AGCTCAGCAGCTGAGATGAAACCGTTCTGGTCCTTGTCGAAGACACGGAAGGCTTCCTTGAGCTCCTCCTCAGAGTCAGTGTCCTTCATCTTCCTTGCCA
TCAGGTTCAGGAACTCCGGGAAGTCAATGGTCCCGTTGCCATCAGCATCAACCTCGTTGATCATGTCCTGGAGCTCTGCCTCAGTAGGGTTCTGACCAAG
GGACCGCATCACGGTTCCAAGCTCCTTTGTAGTGATGCAAC