Detailed information on CNT30594293


BLAST search results

BLAST vs Swiss-Prot:
sp|P93400|PLDA1_TOBAC, E-value = 3e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30682318Eragrostis curvulaTriticum urartu3632.9381.48108forward
CNT30343100Eragrostis curvulaEragrostis tef27.679.5389.1683forward

Expression of CNT30594293

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MAWMYASWMLRSMIWSLPPCLRHLCSKLYSTSHATGPSRRQCMSCHGS

>peptide 2 (32 aa)
SILLTTLSASSLGIRCSAPTSSGLRSSPAFHA*

>peptide 3 (99 aa)
LDLADHLERQLLGDKVQRADVLGPEVIAGLPRVGASEEVLVLDVDEALCAAYGVDVRVLDAAVDDLVLAALLAPPLLEVVQHVPRHGALEAAVYVVPWFA

Sequence

>CNT30594293
CTCGATCTTGCTGACCACCTTGAGCGCCAGCTCCTTGGGGATAAGGTGCAGCGCGCCGACGTCCTCGGGCCTGAGGTCATCGCCGGCCTTCCACGCGTAG
GAGCTTCCGAGGAAGTACTGGTTCTCGATGTAGACGAAGCTCTTTGCGCGGCGTATGGCGTGGATGTACGCGTCCTGGATGCTGCGGTCGATGATCTGGT
CCTTGCCGCCCTGCTTGCGCCACCTCTGCTCGAAGTTGTACAGCACGTCCCACGCCACGGGGCCCTCGAGGCGGCAGTGTATGTCGTGCCATGGTTCGCG