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Detailed information on CNT30593977


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT000139, E-value = 3e-64

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694973Eragrostis curvulaOryza sativa99.126.1690.91220forward
CNT30671877Eragrostis curvulaSetaria viridis82.889292.39184forward
CNT30522081Eragrostis curvulaSetaria italica10038.3494.14222forward
CNT30180108Eragrostis curvulaSecale cereale86.0487.2191.1191forward
CNT30289434Eragrostis curvulaTriticum aestivum97.7537.4888.02217forward
CNT30221546Eragrostis curvulaHordeum vulgare84.6882.4692.02188forward
CNT30392320Eragrostis curvulaTriticum turgidum80.188989.33178forward
CNT30554471Eragrostis curvulaOryza glaberrima99.139.9390.91220forward
CNT30439818Eragrostis curvulaAegilops tauschii95.570.988.68212forward
CNT30249006Eragrostis curvulaAvena sativa98.6525.1789.5219forward
CNT30658643Eragrostis curvulaTriticum dicoccoides97.348.7691.67216forward
CNT30444735Eragrostis curvulaSaccharum spontaneum99.5538.792.76221forward
CNT30680880Eragrostis curvulaTriticum urartu97.341.7891.67216forward
CNT30721558Eragrostis curvulaTriticum spelta99.198.2188.18220forward
CNT30341886Eragrostis curvulaEragrostis tef90.0973.896200forward
CNT30361377Eragrostis curvulaSorghum bicolor10019.7289.64222forward
CNT30596661Eragrostis curvulaOryza meridionalis98.260.8991.74218forward
CNT30370727Eragrostis curvulaOryza glumipatula84.2335.7694.12187forward
CNT30104991Eragrostis curvulaOryza longistaminata98.6592.4192.69219forward
CNT30148227Eragrostis curvulaBrachypodium distachyon75.6866.6786.31168forward
CNT30102585Eragrostis curvulaOryza rufipogon98.6562.2292.24219forward
CNT30577068Eragrostis curvulaOryza barthii84.2340.0494.12187forward
CNT30496422Eragrostis curvulaDigitaria exilis84.6830.4786.7188forward
CNT30117165Eragrostis curvulaOryza nivara84.2341.7493.58187forward
CNT30604388Eragrostis curvulaOryza punctata63.5142.4791.49141forward
CNT30556620Eragrostis curvulaPanicum hallii99.122.3690.45220forward
CNT30551356Eragrostis curvulaOryza brachyantha64.8641.6292.36144forward

Expression of CNT30593977

Peptides detected in this lncRNA

>peptide 1 (35 aa)
RSSSAGCRPRTTSRARCWCRRAPRRGPCRRGRRRS*

>peptide 2 (72 aa)
DLPALVVALAPLPEHDVGAVAHPAVVLVAVEGVEVEARVVDHADAAEALADVLALRPQHRLVQHLRVERHQLH

>peptide 3 (73 aa)
TIFQRWLSPSHHFQSTMLVPSRTPPWSLSPWKASKLRRVLLTMRMQRKPLPTSLLSVHSTDSSSTSGLNGTSFT

Sequence

>CNT30593977
ACGATCTTCCAGCGCTGGTTGTCGCCCTCGCACCACTTCCAGAGCACGATGTTGGTGCCGTCGCGCACCCCGCCGTGGTCCTTGTCGCCGTGGAAGGCGT
CGAAGTTGAGGCGCGTGTTGTTGACCATGCGGATGCAGCGGAAGCCCTTGCCGACGTCCTTGCTCTCCGTCCACAGCACCGACTCGTCCAGCACCTCAGG
GTTGAACGGCACCAGCTTCACC