Detailed information on CNT30593965


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697275Eragrostis curvulaOryza sativa20.283.0294.7457reverse complement
CNT30555931Eragrostis curvulaOryza glaberrima20.284.9794.7457reverse complement
CNT3068307Eragrostis curvulaLeersia perrieri20.286.0894.7457reverse complement
CNT30596758Eragrostis curvulaOryza meridionalis20.285.9492.9857reverse complement
CNT30371243Eragrostis curvulaOryza glumipatula20.284.6294.7457reverse complement
CNT30106741Eragrostis curvulaOryza longistaminata20.285.4294.7457reverse complement
CNT30104239Eragrostis curvulaOryza rufipogon20.287.3794.7457reverse complement
CNT30578115Eragrostis curvulaOryza barthii20.284.5994.7457reverse complement
CNT30117644Eragrostis curvulaOryza nivara20.283.2494.7457reverse complement

Expression of CNT30593965

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MFYFPSDVCFDHQVPKNQINTRVSKNTQQVQ*

>peptide 2 (40 aa)
TIIIDKQYPTITTIINHETLNASIRPCQPPNNNQCSSKLI*

Sequence

>CNT30593965
CACAATTATAATAGATAAGCAATATCCGACCATCACCACCATTATAAATCATGAAACGCTCAATGCGTCCATACGACCATGTCAACCACCAAACAATAAC
CAATGCTCTAGCAAACTAATATAGAAGCTAAGTAAAAGTAAATGTGTGTGTGTGTGTTCAAAGAATGTTCTATTTCCCCTCCGATGTATGCTTTGATCAT
CAAGTACCTAAAAACCAAATAAACACAAGAGTGAGTAAAAACACTCAGCAAGTACAATGACGAACTCGTCGAACAAATACC