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Detailed information on CNT30593897


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-151

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693865Eragrostis curvulaOryza sativa82.172.8986.77922forward
CNT30674319Eragrostis curvulaSetaria viridis73.0282.2591.22820forward
CNT30528288Eragrostis curvulaEucalyptus grandis81.3968.2186.11914forward
CNT30191758Eragrostis curvulaSecale cereale81.6660.2190.84917forward
CNT30305252Eragrostis curvulaTriticum aestivum65.8186.5390.12739forward
CNT30226205Eragrostis curvulaHordeum vulgare81.3988.5790.48914forward
CNT30553671Eragrostis curvulaOryza glaberrima81.4878.6886.45915forward
CNT30242602Eragrostis curvulaAvena sativa81.8380.490.97919forward
CNT30669573Eragrostis curvulaTriticum dicoccoides61.0969.9390.23686forward
CNT30445192Eragrostis curvulaSaccharum spontaneum81.8366.5587.81919forward
CNT30141570Eragrostis curvulaLolium perenne81.9282.5191.2920forward
CNT307928Eragrostis curvulaZea mays82.177.3587.96922forward
CNT30229013Eragrostis curvulaAnanas comosus81.1257.7786.61911forward
CNT30652285Eragrostis curvulaRosa chinensis81.5775.2785.37916forward
CNT30716337Eragrostis curvulaMalus domestica golden74.5367.5586.02837forward
CNT30689805Eragrostis curvulaTriticum urartu81.6666.9890.95917forward
CNT30722465Eragrostis curvulaTriticum spelta7473.688.93831forward
CNT30368741Eragrostis curvulaSorghum bicolor81.7578.686.6918forward
CNT30595768Eragrostis curvulaOryza meridionalis82.167.0588.07922forward
CNT30704857Eragrostis curvulaPrunus avium81.357.8285.87913forward
CNT30110940Eragrostis curvulaOryza longistaminata79.7933.0486.83896forward
CNT30321313Eragrostis curvulaAsparagus officinalis75.7864.9185.9851forward
CNT30148670Eragrostis curvulaBrachypodium distachyon61.0972.3689.94686forward
CNT30576634Eragrostis curvulaOryza barthii61.3564.2193.03689forward
CNT30116852Eragrostis curvulaOryza nivara82.177.6186.66922forward
CNT30604086Eragrostis curvulaOryza punctata59.9368.4688.86673forward
CNT30174646Eragrostis curvulaVigna angularis76.7682.7385.73862forward

Expression of CNT30593897

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MRRCWSGGMPSLSWILALTLSMVSEDSTSRVMVLPVRVLTKICIC

>peptide 2 (30 aa)
MVLPVRVLTKICMPPLSLSTRWRVDSFWML*

>peptide 3 (44 aa)
MPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRSTR*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVFPVRVFTKICIPPLSLSTRWRVDSFWML*

Sequence

>CNT30593897
CAAACCAAGTTTAGGTTCACTTATTCATCACAGATAAACTGAGCTGCTGCCAAAGCAAATGTTTCACAAACACAACCAAGAAGACACAAGACTGAAATAA
CAGACATCATTCGACCGACACACGAACTAGACACACCCATCACCACCATTGGGGAAACATCATACTAAACCAGGGACCACAGAAGCTCCTGGCCAAGGAC
CTACTGGCCACCACGGAGACGAAGCACCAAGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCCGCCAGGGTACGTCCATCCTCCAGCTGCTTGCCAGCA
AAGATAAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGAAGACTCCACCTCCAGGGTGATGG
TCTTACCAGTCAGGGTCTTGACAAAGATCTGCATACCACCACGAAGGCGGAGCACAAGGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCAGCAAGGGT
GCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTG
TCAGATGACTCAACCTCCAGGGTTATGGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCATACCACCCCTGAGCCTGAGCACCAGGTGGAGGGTGGACT
CCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG
AATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCAAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGCCTCCCCTT
AGCCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGACGCTGCT
GGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT
CTTAACGAAGATCTGCATCTGCA