Detailed information on CNT30593881


BLAST search results

BLAST vs Swiss-Prot:
sp|Q53RB0|LOX4_ORYSJ, E-value = 2e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678051Eragrostis curvulaSetaria viridis50.25188.28128forward
CNT30250829Eragrostis curvulaAvena sativa33.7338.5786.0586forward
CNT30684973Eragrostis curvulaTriticum urartu22.3515.292.9857forward

Expression of CNT30593881

Peptides detected in this lncRNA

>peptide 1 (83 aa)
HLGPPVLVLVVAVTLLAHLLPPRLQLHVAPDLAVVRIVDVQVLLDIPLDRPPDHQPIHGVRVVLDQQPDTVRARRIWHRHTSAS

>peptide 2 (35 aa)
PSWATSSCPCGRRDPPRAPPSTTPAAPRRAGPRRR*

Sequence

>CNT30593881
TCCATCTTGGGCCACCAGTTCTTGTCCTTGTGGTCGCCGTGACCCTCCTCGCGCACCTCCTTCCACCACGCCTGCAGCTCCACGTCGCGCCGGACCTCGC
CGTCGTTAGGATAGTAGATGTCCAGGTACTCCTTGACATACCGCTCGATCGCCCACCAGATCACCAACCCATCCACGGCGTACGGGTAGTCCTTGATCAA
CAGCCGGACACCGTAAGGGCTCGACGCATCTGGCACCGCCACACCTCTGCAAGCA