Detailed information on CNT30593354


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671584Eragrostis curvulaSetaria viridis62.3554.4594.97159forward
CNT30338809Eragrostis curvulaEragrostis tef10011.8598.04255forward
CNT30556731Eragrostis curvulaPanicum hallii98.4312.0294.42251forward

Expression of CNT30593354

Peptides detected in this lncRNA

>peptide 1 (43 aa)
FRIYQKKSTFSIPIKATPAAEPMISIEPPVPAQYAISCQKSES*

>peptide 2 (66 aa)
LPNIPKEIHLFHSHKSYSCCRANDKHRTTSTSTVCNKLPEVRILRICIQVIHSHGCSNKWNIVYNC*

>peptide 3 (30 aa)
MVAATSGTLSTTADATPIALAIRSEFGILAS

Sequence

>CNT30593354
CTTCCGAATATACCAAAAGAAATCCACCTTTTCCATTCCCATAAAAGCTACTCCTGCTGCAGAGCCAATGATAAGCATAGAACCACCAGTACCAGCACAG
TATGCAATAAGCTGCCAGAAGTCCGAATCTTGAGGATATGCATTCAGGTCATACATTCCCATGGTTGCAGCAACAAGTGGAACATTGTCTACAACTGCTG
ATGCTACACCAATTGCACTAGCAATAAGATCAGAATTTGGAATATTGGCATCAAG