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Detailed information on CNT30593311


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-156

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30338865Eragrostis curvulaEragrostis tef81.8560.7788.98753forward

Expression of CNT30593311

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWIFALTLSIVSEDSTSRVIVLPVRVLTKICIPPLSLSTRWRVDSFWML*

>peptide 2 (53 aa)
MPSLSWIFAFTLSMVSDDSTSRVIVLPVRVFTKICMPPRRRSTRCKVDSFWIL*

Sequence

>CNT30593311
CGGAAATTAAACAAGTAAAAAATTGACCAGGCGATCATCTCAGAGAAAAATAGATAGTATCAAGGCAGATAAAGTTCACTCCGCAGCAATTGCTAGAGTA
ACACACTCGATGATCAAAGTAGACTGAAAAAAAATAGTGAACAACTTGGACTAGAGTGCAAAGTATCCAACAGGACGACGGCACAATTCAGCTTCCAGCA
AGACATGCAAACCCAACAGGACGAAGAACTTCACTGGCCACCACGGAGGCGCAGCACCAGGTGAAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAGG
GTACGCCCATCCTCCAACTGCTTACCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGG
TGTCAGATGACTCAACCTCCAGGGTGATTGTCTTGCCGGTCAGAGTCTTCACGAAAATCTGCATGCCACCACGCAGACGGAGCACAAGGTGCAAGGTGGA
TTCCTTCTGGATATTGTAATCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCT
TGGATCTTCGCCTTAACATTGTCAATCGTGTCCGAGGACTCAACTTCAAGAGTGATCGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATACCACCCC
TGAGCCTGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGCGTCCTCCTGTCCTTGAGCTGCTTGCCGGCAAAGATCAGGCGCTG
CTGGTCTGGAGGGATCCCCTCCTTGTCCTGGATCTTAGCCTTTACGTTGTCAATGGTATCCGAGGACTCGACCTCAAGGGTTATGGTCTTTCCAGTGAGA
GTCTTCACAAAGATCTGCAT