Detailed information on CNT30593112


BLAST search results

BLAST vs Swiss-Prot:
sp|P26913|NLTPB_WHEAT, E-value = 4e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677319Eragrostis curvulaSetaria viridis22.2224.1892.4266forward
CNT30524578Eragrostis curvulaSetaria italica22.2215.8392.4266forward
CNT30136898Eragrostis curvulaLolium perenne18.5222.8287.2755forward
CNT30342137Eragrostis curvulaEragrostis tef49.8349.1789.86148forward
CNT30367194Eragrostis curvulaSorghum bicolor22.2227.8592.4266forward

Expression of CNT30593112

Peptides detected in this lncRNA

>peptide 1 (83 aa)
VEAAHAAAAARGERATPRRVRDARRQGRTHLAAGDRRRCLRRQQRNHHGEGDQGLLVVQSHLCCGQAKLSTLSRSLQGEMGRQ*

>peptide 2 (68 aa)
LRLRMPLQQLGVSAPRPVAYGMHGARVEPTWPQVIAADASVASSATTTAKATRACLLFRAISAAVKLS*

>peptide 3 (29 aa)
MPPSPAAQPPRRRRPGLACCSEPSLLRSS*

Sequence

>CNT30593112
TGTTGAGGCTGCGCATGCCGCTGCAGCAGCTCGGGGTGAGCGCGCCACGCCCCGTCGCGTACGGGATGCACGGCGCCAGGGTCGAACCCACCTGGCCGCA
GGTGATCGCCGCCGATGCCTCCGTCGCCAGCAGCGCAACCACCACGGCGAAGGCGACCAGGGCTTGCTTGTTGTTCAGAGCCATCTCTGCTGCGGTCAAG
CTAAGCTAAGCACACTCTCTAGGAGCCTGCAGGGCGAGATGGGTAGGCAGTGAGCAGGGTGATGTGAACTACTAGTGTGTTCGTTTAGTGTGTGGGG