Detailed information on CNT30593102


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30192533Eragrostis curvulaSecale cereale73.7323.9585.62160forward
CNT3088050Eragrostis curvulaVigna radiata20.748.9693.3345forward
CNT30468850Eragrostis curvulaSaccharum spontaneum54.8455.6196.64119forward
CNT30681726Eragrostis curvulaTriticum urartu67.2858.8787.67146forward
CNT30365392Eragrostis curvulaSorghum bicolor58.9922.0790.62128forward
CNT30103826Eragrostis curvulaOryza rufipogon27.198.5493.2259forward

Expression of CNT30593102

Peptides detected in this lncRNA

>peptide 1 (71 aa)
HRPAREAALLVHHEAVDVGPEVVQKRRCVMRDRGWPHSLIAFCAAALPSLGTSTTTMSWRASSDGAMYAHML

Sequence

>CNT30593102
CACCGTCCCGCCCGCGAAGCAGCCCTGCTGGTACATCATGAGGCGGTTGACGTTGGGCCGGAGGTGGTGCAGAAGAGGAGGTGCGTGATGCGGGACCGCG
GCTGGCCCCACTCCTTGATCGCCTTCTGCGCCGCGGCTTTGCCCAGCTTGGGCACCTCCACCACCACGATGTCCTGGCGCGCGTCCAGCGACGGCGCCAT
GTACGCGCACATGTTGG