Detailed information on CNT30592668


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019366Musa acuminataCitrullus lanatus10.2933.8190.94331reverse complement
CNT30503608Musa acuminataNicotiana attenuata6.3725.9887.8205forward
CNT30290429Musa acuminataTriticum aestivum2.0229.6889.2365reverse complement
CNT30554259Musa acuminataOryza glaberrima8.153386.26262forward
CNT30228106Musa acuminataAnanas comosus3.2324.0295.19104reverse complement
CNT30358835Musa acuminataLactuca sativa19.0328.8788.73612forward
CNT30337438Musa acuminataCynara cardunculus5.0436.3289.51162forward

Expression of CNT30592668

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MMSLLKPINSASTIIIILPTLIKRASKHYYYLVS*

>peptide 2 (34 aa)
RAISRPFAIAIRAARLYTAWLRYRSYVVVGLKRS*

>peptide 3 (35 aa)
MLGAFPGIGLTTETPQFLACYCSYSLSTPGMGDYW*

>peptide 4 (35 aa)
MSLKVNVNNTKSTRWLPTNQIIGEIPSPLGSLRIT*

>peptide 5 (40 aa)
MPSTRALFATNHSLAGRSGSAFQVGYPNRFPCSTGSLAQY*

>peptide 6 (35 aa)
MHSTERIERAKPSLSFPLPSPYYCFRFHGLVGLED*

>peptide 7 (54 aa)
MNYFSAVIGHCMPKHLFFVYYFHTEKRGMCTSSNKRNCTIGSYAGSISGYRSNH*

>peptide 8 (43 aa)
MDRGKVWHRSPLPSKQYESLSARTAHTPRSELRDLCDHSLSWE*

>peptide 9 (63 aa)
MFDLFQPFTTSLAYRCERLLGSVVEALVPFGCLCMLLPTVGPPSPKRRKRKRKNRFCSLVLAQ*

Sequence

>CNT30592668
ATAGGGCTATAAGTAGGCCGTTTGCTATTGCTATAAGGGCTGCTCGCCTTTATACGGCTTGGCTTCGCTATCGCTCCTATGTAGTGGTCGGCCTTAAAAG
GAGTTAGCCTCTAATGCCTATATTAGAATAGTGCGTTAAGCTTCGCCAGAAGCACAGAAGACTAGGGGAAGCTGTTCGTATACAAGACTCGTTCCTGACT
TACGAGCTCGTGTAGTTAGGCCTCTACTACTTCAATAAAAGAAATAGGGCTTATGCACTCCACCGAGCGAATTGAGCGAGCGAAGCCTTCCTTGAGCTTC
CCACTTCCCTCACCCTACTATTGCTTCCGCTTCCACGGGTTAGTTGGTTTGGAGGATTAATTGATTGAATACCCGAGAACCATAATCTTTCAAAGAAACT
GCTTCTACGACGATGGATAGGGGTAAGGTTTGGCATCGTAGCCCCCTTCCCTCAAAACAGTATGAGAGCCTTTCCGCTCGTACTGCTCACACTCCTAGAT
CTGAACTAAGAGACCTCTGCGACCATAGTTTGAGCTGGGAGTAGCTCCGAGAATCCTTCCAAATGAGCTTGAAAGTCAACGTCAACAACACGAAAAGTAC
ACGTTGGTTGCCTACTAATCAGATCATAGGTGAAATCCCTTCGCCTCTCGGAAGCTTGAGAATAACTTAGAGTGGCGCCTAACCGTTGAGAGCGTCTCTT
GTCTTTTCATTTAATAAGAAGAGTTGTAGATCTTGGACTGGCCCCCTTCGCATGACCTGGAATTAAAGGTCTGTGCTACTATAAGGCCTCTAAACTCCTT
CCTCAGGACACTGTTGCGTTGCCATGGGACGGGGTATCCCCGACTTCTATAGTTCCTTGGTTCGACCTCCTAATGAGAATTGAGGTCCTTGCGCGGGCGT
CTCATCCCTAAGACGAGTTTGCCTTTGTATGGAGTGTCCCGTGGTTCCTCTAGTGCCAGCCGCAGAGAGGAATGCCATCAACTAGGGCGCTATTTGCCAC
TAACCACTCGCTCGCCGGCCGCTCGGGCTCCGCGTTTCAAGTTGGTTATCCTAACCGTTTCCCCTGCTCTACCGGGAGCCTGGCCCAATATTAGATCTTA
TCTACTGCCTTGCTCCTCGGCTCCCTACTGCTCAAGCGGCTCGCTGTAATAGCTTGCTTATCGGGTGGCTCGCACCCCTACCACGGGTGGTGCGGCTAAG
CCAGAGTGGGCTCAGCTGTCGGCCTATGTATCCGGGCGCACGCGTAAAGGCATGATTAGTTCCACGAATCTCACTGCACTGACCATAGTAAACTCCTTCT
CGTTGTATAAAAATAGAGGTATTATTTGAACGACCTGGTACAGCCCAACTATGAGGTACATCAGCAGGTGTTACAATCATACGTAGATTTGTTTTGGCTG
GTACAACCACTCTATTGTCAACTTCTAATAAACGTGATTGACCCAATTCTAGATCATCTTCTGGAATCATATAACTGTCAAAAGTGAGTGACTCTTCATC
TCCACTGTTATAGTCCGAATACTCATAAGGTTGGGTCGACGCCCGCCTCCCCCCAAACTGAACTTGCAAGGTTACCTGCTAAAAGCTTTCCACGCCTACT
CCTATAAACGGATACGGAGCACTATTCTTCTTTAGCCTACTAGAACACCTATAAACTCAGCAAGCACTATGATGAGCCTACTAAAACCTATAAACTCAGC
AAGCACTATTATTATTATTTTGCCTACTCTTATAAAGAGAGCAAGCAAGCACTATTATTATTTGGTTAGTTAAGTCCCCTATCAGAGAAAGACCGTAAGA
CCCCGGTGGAATCGAAGGCCCGCTTACTTATTCATAGGCAGACCCACCCTTTTGAGCCCAGCCCTACCTACTGAAGTGAAGCTGGAACCAAAAAGGACTC
AGTTCAACACTACTCAGTTCAACACTAATATTACAGTCAGAAGAGAAGGTATGGGACGACACGACCTGTTCACTACCGGAAAGCGAATTCGATCCTATAG
TAAGTGAAGTTCGTCTTCTTTGTTCGAAAAGAAAAGAAAGAGTGATGCTTAGTCGGCTCGGCTAAGTTGTAGGCCCCAATAGATAAGATACTGAGTTATT
CCTAACCTCTCCAGTAAGGAGTATAGATTCTCAATGCGAATGTGAATGGCCGGACCTTAGATCTAAAAGGATCTATCTATAGGCCTCTGACCAGAAAGTG
ATTCCACTAAAAGAAAGTCGTTCATGAGACCTTGAATTCCCACTTCTAGCCTGCATTATGCCAGCGGGTAATTGAATTGATTGAGTAACCCTTATATCTT
TATCTAATTTAGGACAGAAGAGATATTCGAAATTAGATCCTCCATTGTGAGAGAATAGGATGACTAAGCAAAAGTGAGAGAATAGGATGACTAAGCAAAA
GAGATATTCGAAATTATATCCATTGAGAGAGAATAGGATGACTCTATTCATAGGTAAATGAGATTGAACCTCCCTACTATACTGTTTACGACATCGCTGA
GTGGAATTCTCTATGTTTGACTGACCTCCTACTGTTCACGAATCGCTTAGGGAAATTCTATTTGACCTCCCTACTATACTGTTTACGACATCACTTTGTT
GAATTCTCTATGTTTGACCTTTTCCAACCGTTCACGACATCCCTTGCTTATCGCTGCGAACGGCTCCTCGGTTCCGTAGTAGAAGCGCTGGTCCCCTTCG
GTTGCTTGTGCATGCTGTTACCTACTGTAGGACCTCCGTCCCCGAAGCGAAGAAAGAGGAAAAGGAAGAACCGGTTTTGCTCTCTTGTCTTGGCCCAGTA
GTTCTGCTACTACTACTGTGGTTGTTGCCAACGGGGATCCCTCATTCCGAAAGGTGACGGGGCCGGCCGTTAGGTAGAAAGTTGTATGCCACTGTGCTGT
GGTGCCGATAGATGAACTACTTCAGCGCTGTTATCGGACATTGCATGCCTAAGCATCTATTTTTCGTATATTACTTCCACACCGAGAAAAGAGGTATGTG
TACCTCCAGCAACAAAAGGAATTGCACCATAGGCTCCTATGCTGGGAGCATTTCCGGGTATAGGTCTAACCACTGAAACTCCCCAGTTTCTGGCATGCTA
TTGTTCTTATAGTCTCTCGACGCCGGGAATGGGAGATTACTGGTAAGCCAGATGCTTCGCGAACTACCGGTACATTTCTAAGCACTTAAATCACCCTCGT
TAAGAGGCGCACTCCA