Detailed information on CNT30592658


BLAST search results

BLAST vs Swiss-Prot:
sp|P68538|MI25_WHEAT, E-value = 4e-82

BLAST vs NONCODE:
NONBNAT003706, E-value = 3e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535768Musa acuminataEucalyptus grandis16.9956.1987.37372forward
CNT30170363Musa acuminataPistacia vera2.8822.5890.4863reverse complement
CNT30176977Musa acuminataSecale cereale6.333.6690.58138forward
CNT30222882Musa acuminataHordeum vulgare21.5249.4289.81471forward
CNT30555485Musa acuminataOryza glaberrima12.0621.1490.53264forward
CNT30435041Musa acuminataAegilops tauschii11.5185.1488.1252forward
CNT30688229Musa acuminataTriticum urartu22.2916.2389.55488forward
CNT30596430Musa acuminataOryza meridionalis15.5841.2394.13341forward
CNT30483535Musa acuminataChara braunii6.4425.5980.85141forward
CNT30104319Musa acuminataOryza rufipogon15.5830.7894.13341forward

Expression of CNT30592658

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MGRTRCSYFTTVGTIASITNKIDTKFSFRCFNCCIGRRSWYGKPFSIRFEMVN*

>peptide 2 (66 aa)
MRREEVAFRSVADLTFRFRHNKAFTVFSHLGAQRNVGNDSTTVPQMYKLILSNRCSALDSPGMTSL*

>peptide 3 (39 aa)
MQFIDSTAIVPRTRKVITKMADPIADSAAATVGTNEAND*

>peptide 4 (41 aa)
MYPSFCNGTGSSVRHPAAKSNNQKKEENESRVFGSLRCSNV*

>peptide 5 (32 aa)
MSSQRSLTYLLIGIAERNVRNKEPIDVQLSYS*

>peptide 6 (33 aa)
MKQMIDPSYHPKKQKIPRSSNLQLITLIQLALT*

Sequence

>CNT30592658
GTGTGTATATGATCTGCTCTTCTGTTAGCATGAGCACATGAATAAGAAGATTTTCCTCGATGTGTATTGGATCCGCTCTTCTGTTAGCATGAACAGATAT
TAATTATGTTTTGATCCTCTTCCTTATGCTTAAGGAATAGAAGACCCTACCCAACCTTGATCTTTCTTAAGACTAGCAAGCCCTCTCGAATAAGTTCTAT
GATGGAAGCGGTGGAAGCGGGGACAAATCTTTCACTTACGGAGAAATTCAAACCTGTTACTATATCATCCTGAAGACGGATGCGACGTGAGGAGGTGGCA
TTTAGAAGTGTAGCTGACTTAACATTTAGGTTTCGGCATAACAAGGCTTTCACTGTTTTTTCGCACTTAGGCGCACAGCGTAACGTTGGTAATGATTCTA
CTACGGTGCCGCAAATGTACAAGCTGATCCTAAGTAATCGTTGTAGTGCATTGGATTCCCCCGGAATGACTTCGTTATGATTGTAGAATTGCTGCAATTC
TTCCTGAATAGACTCCATTCTCCCGTCGAGAGTGTCTTTGAAAGTATCACCTAAACTATTCCGACTGAATATGAGAAAGCCTATAAAACATAAAGCGACT
ATTATTTCTTCATTATTTATTGAGATATTCTTCGAACTTGATGCATAAATAGATGGAATAGCAGCAAATAGCATATTGATATCCTGCATATCCTTTGAAC
GAAATCTCATTGGGCACAGGGGTTATATGTATCCATCTTTCTGCAATGGAACGGGAAGTAGTGTAAGACACCCGGCGGCCAAGTCCAATAATCAAAAGAA
AGAAGAGAACGAAAGTAGAGTATTTGGATCACTTAGATGTAGTAATGTTTAACCTTGCATGCAATTTATAGATTCGACAGCAATAGTACCTCGGACTCGA
AAAGTCATAACGAAAATGGCTGATCCAATAGCGGATTCCGCAGCTGCCACTGTTGGAACTAATGAAGCAAATGATTGACCCATCATATCATCCAAAGAAA
CAGAAAATACCAAGAAGTTCGAATTTACAGCTAATAACATTGATTCAATTGGCATTGACATAATAGGAATATTTCGTCTATTAAGGAGGATTCCCCAAAT
ACCTAAAATAGAGATAATCATGGAAAATGTGAAATATTGAAAAAGATCCGTTTCGGAAACGTGGAATGTCAGAGAAATTCAAATGAGTTAAGGCTTAGAG
TCATTGAGTCCAGGGAACTTTCATTATTATTCTTTGTCAGGCTGTTCCCCTTATCAAACAACGCTATTTCCTTTCCCTTCTTAGAACTCCGTGTATAAGG
AATTCCTTCTTCCTTCCTGATCAACTGAGTCCAAGAACTCAAGGCATCTGGGAGTCTTTACTCCGGGGTAATTGGAATCCCACTCCCCGATTGGTAACAG
CAAGAATTTGGTCAGGCGAGGAGCCCTTACTAAGAACCTAAAGAAAGAAAGACCCTTCCAATTCTTATGAATCACCGCCACCAGAACGTCATTCACTAGA
GGCTGAATCACTTCGTGGTGAGGGACGGGGGAAAGAGGGTTCGTCGGGGGAATACTATTCTACCCAGAGAAAGAATCCTACTTACTTAATAAGATAAGAG
TCGCTATGAAAGCCTTACTAAATAAGATAAGAGTCGCTATGAAAGCGGAAAATAGATAGAATATTGGGTTATTATACATTTGCATTTGAGAAAGATTGGA
TGAGTTCACAAAGGAGCTTGACTTACTTATTAATTGGGATCGCCGAACGCAACGTCCGAAATAAGGAGCCTATAGATGTTCAACTTAGTTATTCTTGAAA
GGCTAGGGTCCTGATCGAGCAAGACCTAGTCCTATCTATCTACCTCTCCAGACACAATATCTTGAGTACCTATGATGGTGACTACATCTGCTGGCATGTG
ATGTTTGGACATAGAATCGAGTCCTTGTGAATGGGCAGAACCAGGTGCTCTTATTTTACAACGGTAGGGACGATTGCTTCCATTACTAACAAGATAGACA
CCAAATTCTCCTTTAGGTGCTTCAACTGCTGTATAGGTAGAAGGAGCTGGTACGGAAAACCCTTCAGTATAAGGTTCGAAATGGTGAATTGAGGTAGAGT
AGACCGATGATCCTGTAGTTATTTAGCAGGCTATAGAAAGAATCGAAAAAGCTTGCTTGCCCACTAAACCCTAAACTCACACAGGTCCC