Detailed information on CNT30592654


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30605136Musa acuminataGossypium raimondii4.0824.1888.35103forward
CNT30418333Musa acuminataPapaver somniferum7.2623.5883.06183forward

Expression of CNT30592654

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNLLRWVTRVLLFLQAIHYQGLLHPSRKMIKILNEMRVRE*

>peptide 2 (41 aa)
TTTEGTGAKEEILFLSDTCLSLFPLLALAMYLQDRGINGYR*

>peptide 3 (59 aa)
MDGLTLHSGILCAWIEKLRWLHTEEPGTNSRFFLEPTTVDATRSNTMGAGGAFLPEDFL*

>peptide 4 (72 aa)
MPVRDWSTQLCSDRKVPQIQKAVFSSSMFSQMTDMLWYPGVCLGTDRFRITAEQHNSCVRIRFLYSAIHLVT*

>peptide 5 (54 aa)
MATGNKTQTNTKEQIQSLTHHLERNDNYAMLITSEIKKEKADSNYELLLDIIRI*

>peptide 6 (55 aa)
MKESTACLCIVVSACWPSFLDSTICPFVIGLLNYVAIERFHKSRRQFFRPVCSHK*

>peptide 7 (43 aa)
MVPRGVLRNRSIPYHRRATQQLCPDQISLLGNSSGYLTVAKEA*

>peptide 8 (50 aa)
MGDPCTSFPTSNTLPRTLAPFQKDDQDPERDESKGIDLATFQTLYLSSRI*

Sequence

>CNT30592654
ACAACCACAGAGGGAACCGGGGCCAAAGAGGAGATTCTTTTTCTTTCTGACACTTGCCTAAGTCTCTTTCCTTTGCTTGCCCTAGCCATGTATCTGCAGG
ATAGAGGTATAAATGGCTACAGGTAATAAAACGCAAACAAATACAAAAGAACAAATCCAATCTCTTACTCACCACCTTGAAAGGAACGACAACTATGCCA
TGCTAATAACGAGCGAGATCAAAAAGGAAAAGGCGGACTCCAACTATGAGCTACTGCTAGACATAATAAGAATATAGAGTTCCGCTTCTAGATAGCTATG
GATATTCTCTCCGCTTCTAGATAGCTATGGATATTCTCTAGGTGGGGAAGGAAATGGATTTCTCACGGAATTGCTTAAGGCACTTTACCTTGAAATTGAT
AACTAACTTAACAGGTAAGCGGCTGTAAGAGAAAGAACTCGATCGAAGGAATGGACGGGCTTACGCTTCATAGTGGAATCCTTTGTGCGTGGATCGAAAA
GCTACGGTGGCTCCATACAGAGGAACCGGGCACCAACTCTCGATTCTTCCTTGAACCTACGACTGTAGATGCTACTCGAAGCAATACGATGGGGGCAGGG
GGCGCCTTTCTCCCAGAGGATTTCCTATAATAGTAAGTAATTCGTTTCACATTTATATAATCTTCGTTTCACATTAGGTAATAGTAAGTAATTCGTTTCA
CATTTATATAATCTTTCGTTTCACATTTATATGATCTTCGTTTCACATTAGGATTCTCTTCTTTCTTTTCTTCCCTCTAGACAGCTGAACTCCGTCAAGC
ATGTAAGTTTATATATAGAGTTTCAGTCGGTTGTTAACCCGTGGTGGTTAGCCTCTCATTCGTTTTAAGTGCTCTCCGAATCGTGCGGGAAGGTTTCTGG
CTCACCAACATTCTCTTCTGCCTGCGGGAACCATATGTCCGAACAGGCCTGGAAAAACAGAGAGGTGCGATCCATTCCTTTGCCACTCAAGTGGTAGTCC
GTGCTCACTTCTTCCCTTTACTAATGAAAGAGTCCACCGCCTGCCTTTGTATTGTAGTCTCAGCGTGCTGGCCTTCCTTTTTAGACTCTACTATATGCCC
GTTCGTGATTGGTCTACTCAACTATGTAGCGATCGAAAGGTTCCACAAATCCAGAAGGCAGTTTTTTCGTCCAGTATGTTCTCACAAATGACCGATATGC
TATGGTACCCAGGGGTGTGCTTAGGAACAGATCGATTCCGTATCACCGCAGAGCAACACAACAGCTGTGTCCGGATCAGATTTCTCTACTCGGCAATTCA
TCTGGTTACTTAACGGTCGCCAAAGAAGCATAAAACATTTCCGATGAGATCCCCCATAGAGCAATTCTTAGATAGCAAGCACTAGCTCCCAGTGCGACTT
AAGAAAATGCAATCAAAGATCCAGATCGAAGAGAATGAAACTAGAGTAGAGTAGTGGTAATTATAGCGGTTCCTTATGAGCCTAGAAAACTAGAGAAATT
ACCTGAAACTAAACTACCGAGCATAGGAAAAAACACTACCCGTAGATACAACATTTATAGTGTGATCCGACAACAACAAATCAGACAATGGCAGAGCCGC
CTGTGATGGAGTGATAGATTTCTCTACGTCCGGAGAACGCTCGACCATGAGTTTTCAAGGTTACAAACAAGGAACTTCCACTTAGAAAATGAGGTCCGTC
TCTATGAGCTCCTGGGCAATGCCGTTATCACTATGTGTATAAACTACTACTCTTTGTTTGGGAGCTAATGAATCTCCTCCGATGGGTGACCCGTGTACTT
CTTTTCCTACAAGCAATACATTACCAAGGACTCTTGCACCCTTCCAGAAAGATGATCAAGATCCTGAACGAGATGAGAGTAAGGGAATAGACCTAGCAAC
GTTTCAAACGCTTTACCTTAGTTCCCGTATATAGGTTGCTTCCGCTTCCGATTCTTCTTCTAATCCGTATTCTACTCCTGCTCCTTATGTATCCTTAGGC
GCAGTTTCGAAAAGAGCATATCCATTTGCGAACTGGGATGAAACTCATTGACTTAGCGCTTATAGAGTTAGGCACTGAACGAACAGAATGGAAGAGAACG
TTATCCATATAGAAAGAAGTCACTCCACAGCTTACTCACTCTTATTGAATTAAAGTAAGGCGGGAAAGAGTAGAGTGGAATGGAGTTCTGTTTTTAAGCT
CAAATGCATTAGAACTACGGTTGTGGGCAACATTCTAGGGATTTGCCATAAGAGTCGTTAACTGAGCTTCCACTTAGGGAAATCCGCACTAGGCTAGGCA
CCGAACTCAAACAAGACTTTATTTCCACGGGCTCCTTTAGCCGAACACAGGACTTGTATTCCCTTTACCCAGCTCCAATTCATTCAAATAATTCCATTCC
AGTTTTAGGGTTAGTAAGCTGTTCATTAAAGAAGGAGTAAGTGAGTTCCGAAGACCCCTCCGGCCCATCAATACTCCATCGAATCTCACTCCATTTCTTT
GATACCTGAATTCGGCAACTAT