Detailed information on CNT30592637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30501326Musa acuminataCoffea canephora21.020.790.5474reverse complement
CNT30544951Musa acuminataBrassica napus21.0211.891.8974reverse complement
CNT30239040Musa acuminataBrassica oleracea21.0213.9991.8974reverse complement
CNT30689619Musa acuminataTriticum urartu21.024.6591.8974reverse complement

Expression of CNT30592637

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MHWAHLMEGQFLSVALPPLSIPRHRPTLKERSLCHDPTS

>peptide 2 (40 aa)
KIIAYSPVAHMNLVTIGMSSRAAAGTALRAYSNSTGYTKS*

Sequence

>CNT30592637
GAAGATCATTGCCTACTCCCCGGTTGCCCATATGAATCTGGTTACTATTGGTATGTCTAGTCGGGCGGCGGCCGGGACGGCCCTACGCGCATACAGCAAC
AGCACCGGCTATACTAAGTCCTAATTAATCTCATCTTTCAGTCTAGCGAGATTCACTTCATTTTTCAATCTCTTAATAGATAGATGGCCTGATCCTGCCG
CAGGCCAGCTCATTTCTCTTATCCATCGGTCCAATGCACTGGGCTCATCTCATGGAGGGCCAATTTCTGAGTGTTGCTCTGCCGCCTCTAAGCATTCCCC
GGCATCGTCCCACACTGAAAGAAAGATCGCTCTGCCACGACCCGACCAGTAG