Detailed information on CNT30592607


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690827Musa acuminataOryza sativa49.297.5884.69209forward
CNT30549210Musa acuminataIpomoea triloba20.757.4592.0588forward
CNT30501657Musa acuminataCoffea canephora20.521.7793.187forward
CNT30220178Musa acuminataHordeum vulgare49.768.5484.36211forward
CNT30207841Musa acuminataHelianthus annuus21.73.4388.0492forward
CNT30687453Musa acuminataTriticum urartu27.122.1589.57115forward
CNT30574571Musa acuminataVitis vinifera48.353.3382.44205forward
CNT30495778Musa acuminataDigitaria exilis27.1227.5189.57115forward
CNT30115707Musa acuminataOryza nivara49.294.884.69209forward

Expression of CNT30592607

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MVPQDPINLGLRCHDIVLWKRAGSSLDKFGPVLHS*

Sequence

>CNT30592607
GAAACGCGTTAGCACTTACTCTCCCCCGCTTGCTGCTTTCTTTTCTTATCGCTGTGTTTCAAAAATGAGATGACAGGTAACCTTAGGCAAGAGTCGTGAC
CATGCTGGTTTTGTTAGGCTTGTTGTACATTGTCAGAAAAGAGAGTTGGTTTAGGTACATCGTTGATTAGTAAACCTTAGGTGCTCTGGTAAGGTCTGGA
CCGTGGTCGTGCGTCTCAGGTTTGCCGGCCGTACTTGTGATGGTTCCCCAGGATCCAATAAACTTAGGTCTACGTTGCCACGATATTGTTCTATGGAAGC
GGGCGGGCAGCTCTTTGGATAAGTTCGGCCCGGTATTGCATTCTTGATTAATAACATGGGCATTGATCTTTCTCACGCATATTCTGTCGTACCGGCATGG
CCCCAAGGATTTGTTTTCGATCGG