Detailed information on CNT30592574


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30511569Musa acuminataSolanum lycopersicum3.5452.8588.46130reverse complement

Expression of CNT30592574

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKAFQKYPKPSVRAFHQPNKERWTQRDDGFYGKTSSLN*

>peptide 2 (38 aa)
GLVISRWLAQCLKLSLASYYFTNFITVGCIRSHRYSTY*

>peptide 3 (45 aa)
MAEDRKGSFIMVLPGTSPVETGWGLLLRGLEHVATVLANPSSPTI*

>peptide 4 (53 aa)
MVSLPLLTYGKEIERETISTRFNSSMIASHGFKGGCLSGSVHTGMNLVFSILR*

>peptide 5 (40 aa)
MQGSGLSLHGVLFLASSFAWAFFGTERITSLCLLGRKEKSI

>peptide 6 (44 aa)
MFARLWPIGKIDDQKETLLVHHLRMMNWIFTRDRSRGIAILIYR*

>peptide 7 (54 aa)
MPCFEVQMRCKNRLFTVPMGRYNSQRRGNHELMPSNLLLLFSNRLFQERRIRCS*

>peptide 8 (29 aa)
MKGNKRSLKERRIRSSCYRIGCCARIRRY*

>peptide 9 (29 aa)
MKNENYDLSSLSLHTSERTVRFMSFFIDR*

>peptide 10 (31 aa)
MDQFEKSFYAFGLRSLGMGMGSGKGKGAVKK*

Sequence

>CNT30592574
TGGCTTGGTCATTAGTCGTTGGTTAGCTCAATGCCTTAAACTGTCTTTAGCTTCCTACTACTTTACTAACTTCATTACTGTTGGCTGTATTCGAAGTCAT
AGGTATTCGACATACTAGATTGAGACTATGTGCACGAATCGCTTTGTGTGGTAAGAGAGGGAAGCGTCGCTTGTTAGAACCATAAAGATGTAGCTGACCA
AGCAAGTCTGTAAGTTCATGAACCCGGGGTAGATGCTCTAGCCACTTCCTTCCTAACTTAAGCTGCTAGCTAGTTCCATTTTAGTAGCAACTAATACACT
AACCCGCTATGAAAGCTTTCCAAAAATATCCCAAGCCTTCGGTGAGAGCATTCCACCAACCAAACAAAGAGCGATGGACACAGAGAGATGACGGTTTCTA
TGGGAAAACATCTTCTTTGAATTGAAAGGAAAGAGGGATTAATGCACAATGGTAAGCCTTCCTTTACTAACCTACGGTAAGGAAATAGAAAGAGAAACTA
TTTCAACGAGGTTCAATTCTTCCATGATAGCTTCCCATGGTTTCAAGGGGGGTTGCCTTTCTGGCTCCGTGCATACTGGGATGAATCTTGTGTTTTCGAT
TCTAAGGTAAGGGACCCAGGCATTATTCTATAATTAATGAAAAACACTCTAAACTAAAATCAATGAAATCATATCTATTCAACATCTGAGAAATATAGTA
ACAAAACACCTTTCCTTATTTGATTTATTCTATAATTGGAAATATGTGAAATAGATAGAAATCCAAAATGCCAAGGTCGTCTGTCTTATGAAAAACGAGA
ATTATGACTTATCTTCTCTATCACTTCACACCTCGGAACGCACTGTGAGATTTATGTCTTTCTTTATAGATAGATAGAAATGGAGAGAAAGGCGCCTTTT
ACATCTTCTTAACCCGAAATGGCAGAGGATAGGAAAGGTTCCTTTATTATGGTACTCCCGGGAACTTCTCCTGTGGAGACGGGGTGGGGCCTGTTGCTCA
GAGGATTAGAGCACGTGGCTACGGTGTTGGCGAATCCCTCCTCGCCTACAATCTGACCTTTTGGTTTGGACCTTTCCCTCAGGGGTGTGGGTAGGAAAAT
GGATAGCGGACGCAAAGCTATTGAACTTGGTTTGCAATGGTCTTTCTTTGTCGAAATGGAATGGCCTTACTACTGATTTGGATTTCTCATGAAAGATTCG
ATCATTACATATTGTAACCAATACCGTAATCAGCATATTTGTTACTCCCCAGAACTCTTGTAACCAATACCGTAATCAGCATATTTGTTACTCCCCAGAA
CTCTTCCTCAGCCAGGGAAGAATTGCAGAGCAAGTATTTGTATTAGTGGCATAGCAAGCCTTCCTCGCAAGTGAAGTATTAGTGGCATAGCAAGCACAAG
TCTCAAGTATTAGTGGCATAGCAAGCACAAAGGCTTTTGGACAGAATAACAGAGCACAAGTATAGTATTAGTTGTATTGCAATCGTTCCTCGTCATTAAT
ATGTTTGCTCGCTTGTGGCCTATCGGGAAAATCGATGATCAAAAGGAGACACTGCTAGTACATCATCTAAGAATGATGAATTGGATATTTACAAGGGATC
GGAGCCGAGGTATTGCGATTCTTATATATCGTTGAACAGAATGTGAGTAGATGAGATATAGAATGCAATAGAAACAAGGACAGCGAACGGATACTCCTAA
CGGTCCGAGCCCTTCCTTCCTTTTCACTCTATTCTTCATTAACCTAGAAATCATGAATCCAATCTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTT
AACAGCCGACCGCTCTACCACTGAGCTACTGAAGAACTTAGGACTTAATTAAGGAAAAAGTAGAAAGAATGACAATCCCCATTGAGCCACAATTTGTTGA
TAGTTAGAATGAATTCGTATACCGGGTCAACTGATCCATTTTCAAAACGGTTCTATGGTTATCCTTTCCCCTAAAACTATACGTCTTTCTGTAACTGGAA
AATATACGCCCACTATTCGTATTTAAAGCAATGGATTGATTCTTCACTCTCCTTAGAAGGAATAGAGTCCAAAAGTGCCTTGAGCCTGAATCCCTTTTTG
CTTTATGTTAGGAGAATAGGCTTTACATGAAGGGGAATAAGCGCTCTTTGAAAGAACGACGTATCCGCTCTTCTTGTTATAGAATAGGTTGTTGTGCTAG
AATCCGCCGTTACTGACTCCGTTGCTATTGAATCAACTGCTGCTGTTACAGAAGGAGCTGCTCGATAATGCCCTGTTTTGAGGTGCAGATGAGGTGTAAG
AATCGGTTGTTCACAGTTCCCATGGGTAGGTATAATAGTCAAAGAAGAGGAAACCATGAATTGATGCCCTCGAATCTGCTCTTACTGTTCTCGAATAGGC
TCTTTCAGGAAAGAAGAATTCGTTGCTCTTAGGCATCCCGTCGAATCAGCTCTGAGGGCAGGAAGGAAGGACACGTAGCCAGAGTCATCCAATATGTTCA
TAAAGACGGGCACTACGGTGAGACGTGAAAAGACCCGATCCCATTCCGACCTCGGTCTACTCTGCTAAATAGGGACTGGATCACCGGGGGATCAATAGAA
TCTAAAGGATCAACTTCTTTGTCTGGATTTGTTACAAGTAACTGATTTCGAACCGTTGATGTAGCTGGGCACTATTCTTGTCATTTGAATCCCCGTCCTT
TGGCCCAGTATGAGTAGGAGCACAACTAGTTCCAGCACTCAAATCCGCTCTTGGGACCACTTGCTTTCTTTCTCCCGGAATGCATAAAGTATCTGCTGCT
AGCTTCACCGCTGCTGTGTAATAGATGGCACTGGTGGAGCTGCTCGATAAGCCACCACAGTCTATGCCTCCTCTTGCGAGTAAGCCGTTGCTTCAACGAA
GGATTTACTGAGCGAACTATTAATATGAAATAAACAAGATCCAAAGTGTTTGCTTCCGGCATCCCCGACGCGGGAAAGGAAAGATGTATAGGTAGGGATA
ACAAAGGAAGTAGACCCCGCAAAGGATAAGGAGGGTAGTCCCGTTACCACCTGGCGGATAAGCATAAGTCTGGCCAAGCAACTGCTCGAGTTATGAGCCA
GTAAAGTGACCAGTGGATAAGTGACCAGTAGATAGATAGCGGGGATCTCCCCTTCTTTCTTTGCTGCCAGGAGAGAGGAATTGGATTGGGATCCAGGGCT
TGTCTTGCTATCGGTTAATATATAGATAGATAAGAAAAGTCATTCCATGCAATCGAGTAATATATGGATCAATTCGAAAAGTCATTCTATGCTTTCGGGC
TTAGATCGCTAGGCATGGGCATGGGATCGGGTAAGGGTAAAGGGGCAGTCAAGAAGTGAGTAGATGTTGGTGCCGATATGTAGTAGTGTCGAGTGAATAC
CGAACAGGTCTATGTTCTTAGGCTCAAATACATAATCCGGACTCTTTCTTCGCTCAAATACATAATCCGGACTCTTTCTTCGTTGATCTGATATCATTTC
TCATTTATTACTTATATCATTTATTACTTATATCATTGATTACTTATATGCAGGGGAGTGGTTTGAGTCTTCATGGAGTTCTGTTCTTGGCCTCTTCTTT
CGCCTGGGCCTTTTTCGGGACTGAAAGAATTACGTCTCTGTGTCTGTTAGGAAGGAAAGAAAAGAGTATCAA