Detailed information on CNT30592560


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30439321Musa acuminataAegilops tauschii33.0986.4197.75178forward
CNT30655393Musa acuminataRosa chinensis31.0425.1588.62167reverse complement
CNT30681032Musa acuminataTriticum urartu39.9693.0792.56215forward
CNT30722000Musa acuminataTriticum spelta25.8460.1789.93139reverse complement
CNT30574572Musa acuminataVitis vinifera74.355.9491400forward

Expression of CNT30592560

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MKEEVIASSNDLSRSIGLNRIHVLGLSKNILFAILI*

Sequence

>CNT30592560
CCCACCCTTTCTTTGAACCTTGTTTGTTAATGATCGAACTTAAAGATATGAACTGAGTGCCATTTGATGAGTAAGATCGAACAAGGGAGAGGGATATGGA
AAGGATGAAGTAATGAAAGAGGAAGTCATTGCTAGTAGTAACGACTTGTCACGATCCATAGGTTTAAATAGAATCCATGTCCTAGGTCTATCAAAAAACA
TTCTTTTCGCTATTCTTATATAATTAAATAGAGTGAAAAGATCTAACCCGAAACTAAGCGGGTACTAACTAAGAGCTGAGTCCTCTCCGAACCGCAGGAG
ATAGTTGCCCATCATACGGCTCACCAACGGAACTTGCCTATTGTTTGGGGGCTCACTCCGGGCAGGTTCGGATCACTTACAATACACGGCTCTAGGAAGG
GGTTAGGTATAGTAAGTTGAAGAAGATGATTCTTTCTCTGAGTTTGTGGAGACGAAAAAGAAAGTCAGCGGAATGAGAAATGTGTATGATCTTATGGTAT
GCTAAAGCCCGAAAGAAATACCCGTGTTTGATCTTTTC