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Detailed information on CNT30592538


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374346Musa acuminataArabidopsis thaliana23.186.1495.4239forward
CNT30708112Musa acuminataGlycine max11.063892.98114forward
CNT30393404Musa acuminataTriticum turgidum22.7920.0796.6235forward
CNT30664613Musa acuminataTriticum dicoccoides15.3240.9393.04158forward
CNT30627909Musa acuminataDaucus carota38.728.6693.48399forward
CNT30680683Musa acuminataTriticum urartu18.6236.595.31192forward
CNT30705826Musa acuminataPrunus avium20.6665.1493.9213forward

Expression of CNT30592538

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLKEYSVKIEYRSVNLKWRIYEKQSIASEG*

Sequence

>CNT30592538
GTCCAATCGAACTATGAGCTAGAGGTCTTTTGACTTTCGTTTGGGCCATGGCGGCCACTGCTCCTAAGATCATAGAAGCAATGCTGCAGAAAAAGAAGAT
TTGTTGCAATGTACCTCCATAGGAACCAACCATAGAAACACGTGACATATTTGCAGAAATAGAGATTTTAGGCGCAAGAGAAAGGAATGCTGTAACCGGG
GTGGGTGAACCCTCATAGATATCGGGTGCCCACATATATTGAAGGAACTGCAGTGATCTTGAATAGGGATCCTACTGCGATAAAGAGAATCCCAAGAAAA
ATACCACTAGATTGAGCACCAGTTATTTCGTATCCGGTGAAAATCTTGGCTAATTGATCGAAGTGGGTAGCTCCAGTAGACCCATAGATCATGGAACAAA
TAGGGTGGGTTTGAGAAACTTATAGTATAGACGCTAACCCCCCTCGTAACCGTACGTGCGACTCTCACCGCATACGGCTCGCACAAAGACTCTGAATTCC
ATTCCATCCTGAGCTTTTGAATCCACCTATCCCTCTCCAATCCTCGATCATACTTGCATTGCTTAAAGTCCAATCCTCGATCATACTTGCATTGCTTAAA
GAATATAGCGTTAAGATGCTTAAAGAATATAGCGTTAAGATCGAGTATAGAAGCGTTAATCTAAAGTGGAGAATCTATGAAAAACAGAGCATTGCTTCCG
AGGGCTAAGAAGCTTCGAGGAGTTTGAAACGGAAAAGTAAGGTCAGCGTCAGCTGCTGGCTGCTGGCTGCTGGGTAAGGGTATCGCTGGGCTTTGTCCCG
AACCAAGGAGGCATTATTAAGGGTGCATGCGTGTGCCGACAGACGTAAAGCCTACGCCTAGCTTCTATTCTAGTTGGGATTGGATATAGCTGATAATGGG
AATATCTAACGATCGTAGTTGTTCGCCAACCTCTCTAACTAGCATACGATACAATTGCAATTAGTCTATCTTACTAAAGAGAAAGAGCTTCGCTCGGCCT
ACGCTGACGCCTACTTGATCTTATCTTGAGT