Detailed information on CNT30592530


BLAST search results

BLAST vs Swiss-Prot:
sp|P14875|RT14_OENBE, E-value = 3e-30

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30378677Musa acuminataArabidopsis thaliana20.886.3990.86175forward
CNT30390425Musa acuminataTriticum turgidum24.8222.0191.35208forward
CNT30443388Musa acuminataAegilops tauschii24.8242.9892.31208forward
CNT30229709Musa acuminataAnanas comosus13.2523.3296.4111forward
CNT30689753Musa acuminataTriticum urartu23.6320.5892.93198forward
CNT3055620Musa acuminataAmborella trichopoda22.0882.5987.57185forward
CNT30148125Musa acuminataBrachypodium distachyon13.2539.7895.5111forward

Expression of CNT30592530

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRRVNQLSYCKMSVGSTNETNNILVFLIWNPIWLC*

>peptide 2 (50 aa)
MPIKGPRDANPRKTIREMRKNLTTERGRPVEIHRFLIRAKALFLGNMDNL*

>peptide 3 (54 aa)
MVGSARRREHEQEFSDNGKRIVNNVLVVPFVTLDVVHGVIFYLSKSTTQLEVYV*

Sequence

>CNT30592530
TAAGCGATCTGCCAAAAGCAACCAAAAGATTCCTTGGTGAATCGGGCGAAAACTGGAACTACGAATAAACATATTTTTCATAAAAGGTAAAGCCAACAGA
GATATAAAAACTGGTGCTATTGCGGCTACACCTCCGGATTTGTCGGGTATACTGCGAAGAATGGCATGGATCGGTAGGAAATACCATTCCGGCACAATAT
GAGGCGGGTCAATCAACTATCATATTGTAAAATGAGCGTAGGTTCTACCAACGAAACGAATAACATATTGGTCTTTCTCATTTGGAACCCTATTTGGTTG
TGTTAGTAATGGGGCCCACTCCCAGACTCTGACTTAAATGGTGGGCTCAGCACGTAGGCGTGAACATGAACAAGAGTTCTCTGACAATGGAAAAAGAATT
GTTAATAATGTCTTGGTGGTGCCATTCGTCACTTTAGATGTTGTTCACGGGGTGATCTTCTATCTTTCCAAGAGTACTACCCAGCTTGAAGTCTATGTCT
GATTCGGTGGAGAGCCAATCGATTCCCGTGCTGTTATCATCTCTGCTGCGAGAGTTGGGATTACTCTATTAGGTCTTTTCGGTCAGGAGCCATATGGTAA
TGTACCTAAAACCCTTGCTTGTGTACCAGCTTCGGAGCTATAACCTTTGTTGTGCTACCAAGAGGATTTTGTAATGCCCATCAAAGGACCTCGAGATGCT
AATCCACGAAAAACAATACGAGAAATGCGAAAGAACTTAACTACGGAACGAGGGCGACCCGTGGAAATACATCGGTTTCTTATTCGTGCAAAGGCACTAT
TTCTTGGCAACATGGACAACTTATAACGAAGCTTGTCC