Detailed information on CNT30592246


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZP9|CP122_ARATH, E-value = 1e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523223Musa acuminataSetaria italica29.1834.3487.72171forward
CNT30290105Musa acuminataTriticum aestivum26.1133.786.93153forward
CNT30658492Musa acuminataTriticum dicoccoides26.1124.8888.24153forward
CNT3015512Musa acuminataZea mays24.0616.485.82141forward
CNT30216686Musa acuminataKalanchoe fedtschenkoi22.3522.8289.31131forward
CNT30654798Musa acuminataRosa chinensis18.0920.3587.74106forward
CNT30580422Musa acuminataEchinochloa crusgalli26.4523.187.74155forward
CNT30497736Musa acuminataDigitaria exilis28.524.0686.83167forward
CNT30557621Musa acuminataPanicum hallii26.4528.2389.68155forward

Expression of CNT30592246

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MLSETFSEMSGGVDGALATSTVLRRRRTPRSSKGRSLAWVCRGLSGSAFTNTALRVERLTPHTVVAMVTACIFLR

Sequence

>CNT30592246
CCCATTGCCTTCATTAAATAGTGAGTACATAAACTGTATTGCTATTGCAGAGTCAAAGCAGCTGTAATACAATAGAGTTCAGATGCAAGTAGAAGTTTAG
GCAGAGAGAAGCCACCACAAGTTTCTGCAAGCATCATGCAGTGACGCAGTGTGTCTGGATCACCTTCTCCACTGCCTCTCCTCGATTACTACTTCAGTTG
TCGTAGGTGCGGCACTCGTCGGTCTCGGGGGGGTCGGAGTCAGTCTTGAGCTTGTCCCTGGCGTGGCTCGCCGCGGCGCTGAGCTCCTCCACCTCGTCCC
ACGCCGCCGCGCACTCCCCGGCCACCGCGTCCCCCGCGCACGCCTCCTCCGCCTTCTTGATGCTCTCCGAGACCTTCTCGGAGATGTCGGGCGGCGTCGA
CGGCGCGCTCGCCACGAGCACCGTGCTGCGGCGGCGGCGAACACCGCGGTCGAGCAAAGGGAGGAGCCTTGCGTGGGTCTGTCGCGGCCTAAGCGGCTCC
GCCTTCACGAACACAGCCCTTCGGGTGGAGAGGCTCACGCCACATACTGTCGTCGCCATGGTTACTGCCTGCATCTTCTTGCGGTT