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Detailed information on CNT30592165


BLAST search results

BLAST vs Swiss-Prot:
sp|P21218|PORB_ARATH, E-value = 9e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693247Musa acuminataOryza sativa33.8113.3892.6395forward
CNT30522232Musa acuminataSetaria italica60.517.0586.47170forward
CNT30701275Musa acuminataQuercus lobata32.3815.7786.8191forward
CNT30379859Musa acuminataManihot esculenta33.4515.0287.2394forward
CNT30710762Musa acuminataGlycine max35.9429.7186.14101forward
CNT30164816Musa acuminataPistacia vera24.9134.319070forward
CNT30553602Musa acuminataOryza glaberrima33.8120.4792.6395forward
CNT30172855Musa acuminataTrifolium pratense25.278.6485.9271forward
CNT30610520Musa acuminataGossypium raimondii26.338.8891.8974forward
CNT30362130Musa acuminataSorghum bicolor40.2134.0492.04113forward
CNT3052558Musa acuminataAmborella trichopoda22.4215.2988.8963forward
CNT3038429Musa acuminataCucumis melo38.0833.7585.98107forward
CNT30101150Musa acuminataOryza rufipogon23.4910.1295.4566forward
CNT30575951Musa acuminataOryza barthii31.6720.5192.1389forward
CNT30113199Musa acuminataFicus carica38.792589.91109forward
CNT30333083Musa acuminataCynara cardunculus60.546.0781.18170forward
CNT30726195Musa acuminataLupinus angustifolius32.7415.4686.9692forward

Expression of CNT30592165

Peptides detected in this lncRNA

>peptide 1 (92 aa)
LCESFACFLLGDEAFGDVLLEGRKEEANVTPVSSWNRLWNSCIVSMLQTLLSLYALAPSNSPPSIMVEPPSPFNPPASPRRSPRFAFGGMFPA

>peptide 2 (29 aa)
TCASLLPASSSETKPLVMYFWKGGKRRQM*

Sequence

>CNT30592165
ACCTGTGCGAGTCTTTTGCCTGCTTCCTCCTCGGAGACGAAGCCTTTGGTGATGTACTTTTGGAAGGGAGGAAAGAGGAGGCAAATGTGACCCCGGTCTC
CTCGTGGAACCGCCTGTGGAACTCCTGCATCGTGAGCATGTTGCAGACCTTGCTGTCCTTGTACGCCTTGGCGCCGTCGAACTCGCCTCCGTCGATCATG
GTGGAGCCGCCGAGCCCATTCAATCCCCCCGCGAGCCCTCGCAGGTCTCCCAGGTTTGCTTTCGGGGGTATGTTCCCGGCC