Detailed information on CNT30592159


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672571Musa acuminataSetaria viridis39.5130.4886.72128forward
CNT30512691Musa acuminataJuglans regia33.956.7785.45110forward
CNT30393881Musa acuminataTriticum turgidum33.0226.5589.72107forward
CNT30441013Musa acuminataAegilops tauschii76.8569.3687.95249forward
CNT30624277Musa acuminataDaucus carota25.6217.4486.7583forward
CNT3054135Musa acuminataAmborella trichopoda33.0217.6384.11107forward
CNT30151099Musa acuminataBrachypodium distachyon39.5133.3389.84128forward
CNT30725998Musa acuminataLupinus angustifolius39.5160.9585.94128forward

Expression of CNT30592159

Peptides detected in this lncRNA

>peptide 1 (35 aa)
PPLYSQMKPRYHTLVIASKLRSLLCLCSSGSSLSP*

>peptide 2 (63 aa)
MRPTFCPGGASRRTVEAWPMCWPAVPLHPELVVCIASLEHWLLSSPTTSNLPNHGAAITWDNLL

Sequence

>CNT30592159
CACCACCATTATACTCTCAAATGAAACCAAGGTACCATACGCTTGTTATTGCTAGCAAACTAAGAAGTCTTCTCTGCCTTTGCAGCAGTGGCAGCAGCCT
GTCCCCGTAGACGACCGGTCCTCCTTGCAGCAATGAGACCAACCTTCTGCCCAGGAGGAGCATCACGGCGAACAGTGGAAGCATGGCCAATGTGTTGGCC
AGCAGTTCCTCTTCACCCTGAACTTGTGGTATGCATTGCCAGCCTTGAGCATTGGCTTCTCAGTTCTCCCACCACCAGCAACCTGCCCAATCATGGCGCG
GCAATTACTTGGGACAATCTTCTT