Detailed information on CNT30591949


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 3e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315993Musa acuminataCorylus avellana71.434.680.4347forward
CNT30549216Musa acuminataIpomoea triloba53.745.8780.84261forward
CNT30616384Musa acuminataSesamum indicum65.2347.0381.07317forward
CNT30628702Musa acuminataVigna unguiculata82.5158.5478.8401forward
CNT30554634Musa acuminataOryza glaberrima44.242682.79215forward
CNT30648253Musa acuminataRosa chinensis33.3324.2982.72162forward
CNT30366857Musa acuminataSorghum bicolor83.1341.1479.21404forward
CNT30355182Musa acuminataLactuca sativa59.8841.5780.76291forward
CNT30573870Musa acuminataVitis vinifera89.361.5681.11434forward
CNT3035160Musa acuminataCucumis melo63.7961.5180.97310forward
CNT30577348Musa acuminataOryza barthii28.654.0984.17139forward
CNT30584594Musa acuminataEchinochloa crusgalli76.7560.3679.09373forward
CNT30497803Musa acuminataDigitaria exilis36.6324.7683.15178forward

Expression of CNT30591949

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MMVKSGYMKVMSDYRKVMLDYRMEMLDCRLGKSDCKLEK*

>peptide 2 (45 aa)
CNLEMIDRMDWMVTALDCLENKQAKDCTLLRQDCNLEMWGYNLGM*

Sequence

>CNT30591949
TGTAATTTGGAGATGATTGACCGTATGGACTGGATGGTGACAGCCTTGGACTGCTTGGAGAATAAGCAAGCGAAGGACTGTACTTTGCTGAGGCAGGATT
GTAACTTGGAGATGTGGGGCTATAACTTGGGGATGTAGGACTATAGCTAGGAGATGTTGGACTGTATCCCGGAGAAGTTGGGCTATAGGCAGGTGAGGTA
GGACTGTATGATGGTGAAGTCGGGCTATATGAAGGTGATGTCGGACTATAGGAAGGTGATGTTGGACTATAGGATGGAGATGTTGGACTGTAGGCTGGGG
AAGTCGGACTGTAAACTGGAGAAGTAGGGCTGTAGCTTGGCGAAGTAGGACTGTAACTGGGGGAAGTTGGGCTGTAACTGGGGGAAGTAGGACTATAAGT
AGGAGATGTAGGGCTATAACTGGGAGAGGTCGGGCTGTAGCTGGGAGAAGTTGGCGAATATGATGGACTTGTCGGAGAGTAAGCAG