« Back to Musa acuminata search


Detailed information on CNT30591852


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DG05|PSAH_ORYSJ, E-value = 7e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693639Musa acuminataOryza sativa23.0210.0291.6796forward
CNT30673198Musa acuminataSetaria viridis24.9445.6189.42104forward
CNT30521234Musa acuminataSetaria italica25.4214.6689.62106forward
CNT30532753Musa acuminataEucalyptus grandis15.8326.6187.8866forward
CNT30178026Musa acuminataSecale cereale20.1415.0584.5284forward
CNT30285918Musa acuminataTriticum aestivum20.1417.8784.5284forward
CNT30384456Musa acuminataTriticum turgidum20.1415.784.5284forward
CNT30435366Musa acuminataAegilops tauschii20.1418.4684.5284forward
CNT30240454Musa acuminataAvena sativa21.8225.8589.0191forward
CNT30655703Musa acuminataTriticum dicoccoides20.1423.484.5284forward
CNT30131217Musa acuminataLolium perenne21.8218.2487.9191forward
CNT3011150Musa acuminataZea mays25.4212.5387.74106forward
CNT30679604Musa acuminataTriticum urartu20.142584.5284forward
CNT30338878Musa acuminataEragrostis tef25.4213.5986.79106forward
CNT30367799Musa acuminataSorghum bicolor22.0614.1390.2292forward
CNT30370255Musa acuminataOryza glumipatula23.0215.0791.6796forward
CNT30318832Musa acuminataAsparagus officinalis21.824.4685.7191forward
CNT30149479Musa acuminataBrachypodium distachyon19.6621.387.882forward
CNT30101773Musa acuminataOryza rufipogon23.0211.6591.6796forward
CNT30496965Musa acuminataDigitaria exilis23.0228.2491.6796forward
CNT30116717Musa acuminataOryza nivara23.0211.6891.6796forward
CNT30604129Musa acuminataOryza punctata23.0215.3192.7196forward

Expression of CNT30591852

Peptides detected in this lncRNA

>peptide 1 (47 aa)
ACLIDVHTNHLYLAARPRSRWQLRPLLDWQYVARGGGSQVGEGPSEP*

Sequence

>CNT30591852
GAGCATGTTTGATTGATGTTCACACAAATCACCTATATCTTGCCGCGCGGCCCAGGAGTAGGTGGCAGCTGAGGCCCCTTCTTGATTGGCAGTACGTCGC
CCGAGGAGGTGGCTCCCAGGTAGGCGAGGGGCCGTCGGAGCCGTAGAGGTCCCACTGGCCGGTGGTGTTCCCGAGGTCCTCGAGGTCGAAGTACACGCTC
TTCTCACCGTACTTTGCAACCACGGCGGTAGACCTGAGGTTGGCACGAGGGGCGGCTCGGCGGGAGGGCTTGAGGGCGAGCTTCTTACCGTTGAAGGAGC
TCCCAGCGAGGCCTTTCACGGCCACCGGTTGCACGGCTGCGACGGCGGTGAGGGAGGCCATTGTTGCGTTCTTGCCCCTTCGCTGCTACAATTCGAAGGA
CTGCGTTCTTTGCCTCG