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Detailed information on CNT30591347


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 3e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543822Musa acuminataBrassica napus9.0920.3493.2259forward
CNT30310285Musa acuminataCamelina sativa9.0926.9493.2259forward
CNT30319154Musa acuminataAsparagus officinalis26.1925.2283.53170forward
CNT30117996Musa acuminataOryza nivara26.1922.8882.35170forward
CNT30604900Musa acuminataOryza punctata26.0425.9681.66169forward

Expression of CNT30591347

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MKLMHCTWRLLSKPMMRMKAWGYSICFSNSSSFSVGR*

Sequence

>CNT30591347
CTTCTTAACATACAAGCTCCGCGTTCTTGGGGAAACAAAACATAGACGGCCTCAGTGCGCTGCTGCACTGTCGGCGGTTGCGTAGAGGAGACAACGAGAG
AAGGGGAAACATCCAACACTGAACCAAAGAAAGCAAATCCGAAGAGCCGGATCCGAATCGTCTAGTAGCCGGTCGGCTTGTAGGCGATGAAACTGATGCA
CTGCACCTGGCGGTTGTTGTCGAAGCCGATGATGCGGATGAAGGCGTGGGGGTACTCGATCTGCTTCAGCAACTCCTCGTCCTTCAGTGTCGGAAGGTAG
GACAGGGTCTCAAACTTCTTCATGCCCTCGATCGGCCACACCTGTCGTAAGAATTACATCCACAGTATATGATTCGTAACGGCTATCTCGGTAACAGAGG
TTTCCGACTCGAGCCACGAGCCTTGTACGTGCGTACCTTCATGCACTGAACTCGGCCGCCATTGCTGGGGAGGTGGGAGAGGTCGGCGCGGAGGCGGACT
TGAGGCCGGTGAACGGCGCCACCATGCTGGATTGAGCCGGGGAAGCCCGGGTGAAGGTGGCAGCCGAGGAGACCATCATGGAGGAAACCATCGTTGATTC
CTCTTTCTGACACTCACCTAATTCGACCCGAGATCAAGAAGAAGACTCG