« Back to Musa acuminata search


Detailed information on CNT30591253


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71V89|H33_GOSHI, E-value = 2e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697930Musa acuminataOryza sativa36.5426.1584.21114forward
CNT30675375Musa acuminataSetaria viridis40.3844.6892.06126forward
CNT30523795Musa acuminataSetaria italica36.5418.4292.98114forward
CNT30315797Musa acuminataCorylus avellana29.4913.9288.0492forward
CNT30700039Musa acuminataQuercus lobata32.3720.6584.16101forward
CNT30376827Musa acuminataArabidopsis thaliana33.0143.6484.47103forward
CNT30279437Musa acuminataChenopodium quinoa34.2913.9784.11107forward
CNT3069242Musa acuminataQuercus suber26.2815.387.882forward
CNT30631185Musa acuminataVigna unguiculata38.1410.2684.87119forward
CNT30200358Musa acuminataPisum sativum23.7211.985.1474forward
CNT30709007Musa acuminataGlycine max33.0143.2883.5103forward
CNT3048083Musa acuminataPrunus dulcis34.6215.3885.19108forward
CNT30125320Musa acuminataPhyscomitrium patens29.499.4682.6192forward
CNT30184957Musa acuminataSecale cereale38.1421.0690.76119forward
CNT30304662Musa acuminataTriticum aestivum38.1423.1190.76119forward
CNT30219843Musa acuminataHordeum vulgare39.121.2589.34122forward
CNT30398097Musa acuminataTriticum turgidum25.6410.4692.580forward
CNT30565750Musa acuminataActinidia chinensis32.059.184100forward
CNT3084857Musa acuminataVigna radiata21.795.5489.7168forward
CNT30508427Musa acuminataSolanum lycopersicum20.8318.7389.2365forward
CNT30435418Musa acuminataAegilops tauschii39.4228.692.68123forward
CNT30255419Musa acuminataAvena sativa38.1422.3390.76119forward
CNT30657055Musa acuminataTriticum dicoccoides39.123.3390.98122forward
CNT30259840Musa acuminataBrassica rapa32.3734.9582.18101forward
CNT30613891Musa acuminataArabis alpina29.4922.8382.6192forward
CNT30464179Musa acuminataSaccharum spontaneum36.5423.3691.23114forward
CNT30141592Musa acuminataLolium perenne39.113.3590.98122forward
CNT306284Musa acuminataZea mays29.1742.5287.9191forward
CNT30606039Musa acuminataGossypium raimondii21.7914.3588.2468forward
CNT30686633Musa acuminataTriticum urartu26.629.9695.1883reverse complement
CNT30719922Musa acuminataTriticum spelta39.4220.8191.06123forward
CNT30368649Musa acuminataSorghum bicolor32.3724.0587.13101forward
CNT30622400Musa acuminataCajanus cajan22.767.7694.3771forward
CNT30596421Musa acuminataOryza meridionalis35.2615.6790.91110forward
CNT30358587Musa acuminataLactuca sativa32.3718.482.18101forward
CNT30154413Musa acuminataPrunus persica32.3726.186.14101forward
CNT3058538Musa acuminataAmborella trichopoda27.567.9787.2186forward
CNT30329187Musa acuminataDioscorea rotundata33.3326.885.58104forward
CNT30148402Musa acuminataBrachypodium distachyon42.6327.0990.98133forward
CNT3099660Musa acuminataOryza rufipogon29.4920.3194.5792forward
CNT30585391Musa acuminataEchinochloa crusgalli36.5417.5190.35114forward
CNT30114434Musa acuminataEutrema salsugineum42.6333.4284.96133forward
CNT3018856Musa acuminataCyanidioschyzon merolae18.9125.6586.4459forward

Expression of CNT30591253

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MSLGMMVTRLAWMAQRLVSSKSPTRYASAASCSFRISSSVLFWYLRISRRATVPGRYLWGFFTPPVVGA

Sequence

>CNT30591253
GTTATTTTCCTAAGAGGATCAATCCATCGACGAGAAAAGGAGGGCTAAGCTATCATCCATCGAGGTCTTAAGCACGTTCACCACGGATACGGCGGGCGAG
TTGGATGTCCTTGGGCATGATGGTAACCCGCTTGGCGTGGATGGCGCAGAGGTTGGTGTCCTCAAAGAGCCCTACCAGATACGCCTCCGCCGCCTCCTGC
AGCTTCCGGATCAGCAGTTCCGTGCTCTTCTGGTACTTGCGGATCTCACGTAGAGCCACCGTCCCCGGGCGGTACCTGTGGGGCTTCTTCACACCGCCGG
TCGTCGGCGCCG