Detailed information on CNT30591166


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09FY5|YCF2_PLAOC, E-value = 0.0

BLAST vs NONCODE:
NONBRAT004795, E-value = 2e-70

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677123Musa acuminataSetaria viridis34.0387.1986.06667forward
CNT30201731Musa acuminataPisum sativum5.2634.886.41103forward
CNT3081516Musa acuminataBrassica juncea14.6910092.01288forward
CNT30607759Musa acuminataGossypium raimondii23.2715.2589.47456forward
CNT30627097Musa acuminataDaucus carota12.6547.7893.55248forward
CNT30622146Musa acuminataCajanus cajan20.7728.5694.35407forward

Expression of CNT30591166

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MNQHLYIDVEGFVWEVISTFDISSSAKNSRRENTETKG*

>peptide 2 (33 aa)
MNQQFEVPFLRILDEPAFIHRCRRFCLGSNKHL*

>peptide 3 (42 aa)
MSLDYYQTDCNLFLSVRVPPERLLLLIGHELDQNHSQRIYKK*

>peptide 4 (29 aa)
MGDLPIEKIHRPETKRKVYLFSLVIQLNQ*

>peptide 5 (33 aa)
MNWLTRKKPCSLEDLSRVWYCMVSLCKNSESFS*

>peptide 6 (33 aa)
MILILFMILILFMIKGPLAPSPIEKSGLFNTIT*

>peptide 7 (73 aa)
MELRSKIWNKKCFHDSTTRPILFHLIPFSWPHIFTAKEWEIFLLLHESNVSFHPGKAIPFSTLSLLFDPIAFR*

>peptide 8 (40 aa)
IPTSTHNPADKVHYIVRFRDWRLTHSVTLALDVPKMDRVG*

Sequence

>CNT30591166
ATACCCACCAGTACCCATAACCCAGCAGATAAAGTACATTATATAGTCCGTTTTAGGGATTGGCGACTTACCCATTCAGTGACTTTGGCACTGGACGTTC
CCAAAATGGATCGGGTCGGGTGAATTAGAGAATAGACAGACGTCTGTTGGAGACAGACGTCTGTTGGCATTCCGGCCTTCCTTCTCCTTTCAGGGCCTAT
CCGAAAGAGAATCCAGTACCTCTTGGTCGTGAATATCTGAATAGGACGAACCGGCCTCCGTGGATATCTTTGCTTCGGAACAAAACAATTAGAATTAGGC
TCGGTCAACCGGAATATGTATTATCCATATGGGGGATCTTCCAATTGAGAAGATCCATCGACCTGAGACGAAGAGAAAGGTCTATCTATTTTCTTTAGTT
ATTCAGTTAAACCAATGATTCGTTATTGGAGCAGATAGCAACAAGCATTTCATCGGACATGCGTATTTTTTATTTTCCGATGGATTTACATGGTTTCATT
AATGGAAATTGTTTGATGTAGTGAGTAATAGACTCTGGTTGTTCGCCGTTCAAGAATTCTTGTTTAGGCAGTTCATATCATCCATACATAGTGTTTTGAT
CTAAGATTTCAATTCTTCCATGTTTCAGCAGTAGCATATTGTTCCATGGAGCTAAGGTCCAAAATATGGAATAAAAAATGTTTCCACGACTCTACCACCC
GGCCAATCCTGTTCCACTTAATCCCTTTTTCATGGCCACATATCTTTACGGCTAAGGAATGGGAAATCTTTCTCCTGTTACATGAATCAAATGTTTCATT
TCATCCGGGAAAAGCCATCCCTTTCTCAACATTGTCTTTGTTATTTGATCCAATAGCGTTCCGTTAGATAGGAACAGATTTGATAAATACTGATAACTCT
CGGATAGAGTATTAGAAAGGAAAGATCCATTAGATAATGGACTATTGCTTCTAAGCCATCTCTGGCGATGAATCAACAATTCGAAGTACCTTTCTTGCGT
ATTCTTGATGAACCAGCATTTATACATAGATGTAGAAGGTTTTGTTTGGGAAGTAATAAGCACCTTTGACATCTCTTCATCTGCAAAGAATTCTCGACGT
GAAAACACAGAGACAAAGGGCTGATCTTTGAATAGGAAAAAGAATGGATCCGCAGGGTCCCAAATGAATTGGCTTACTCGAAAAAAGCCTTGTTCTTTGG
AAGATCTATCTCGTGTCTGGTACTGCATGGTTTCACTCTGCAAGAACTCCGAATCATTCTCTTGAAGCTCATCCTCTTCATGATACTCATCCTCTTCATG
ATACTCATCCTCTTCATGATAAAAGGTCCGCTTGCCCCGAGCCCGATAGAGAAAAGTGGGCTTTTCAATACAATCACATAGTTTGCCACAAGGGCGCCAT
ATTCTAGGAGCCCAAACTATGTGATTGAATAAATCCTCCTTTATCTGTTGCAGGTCGACGACCTCTTCCTCTTCTTCAAACTCCGATTCGTATTTTTCAT
ATAGAAATCTCTGATCAACGATAGAACAAGATCTGTTTTGCATCATATCTAACTGTTCGGACCGAAGAAGTAATGTCACTCGATTATTATCAAACTGACT
GCAATCTTTTTCTGTCCGTGAGGGTCCCACCAGAGCGCCTTCTACTTCTAATAGGCCATGAACTAGATCAGAATCATTCTCAACGAATCTATAAGAAGTG
ATCCAATTTTTTTCATCAGGTCCGGGTGAAGACCAAAGATCTTGAGCGACCGATCCGGCAGAACAACTCAAAAGATAAAGAAGTATCGTTAATTTCTTCA
TGCTCGTTCCAAGTTCGAAGTACCATTTGTACAAATAAGAATCCCCTTCTGATCTCTTCTTCATATAGATAGATATAGGATCTATGGGGCAATTACTTAG
AAGTACATTTTGTGCAACAGCCCTTCCTATCTGATAGAAAAGGATCCCATGATCCNATAT