Detailed information on CNT30591107


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ARZ9|R27AA_ORYSJ, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693922Musa acuminataOryza sativa45.124.7391.3138forward
CNT30674769Musa acuminataSetaria viridis44.4427.6494.12136forward
CNT30553804Musa acuminataOryza glaberrima45.122.8991.3138forward

Expression of CNT30591107

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MPSLSWILAFTLSMVSDDSTSRVIVFPVRVFTKICILPAGGSGPRTRRR*

>peptide 2 (87 aa)
GGIVDLVELEHGELDLLLLVLDLLGLGVGLLLALLGAAAEALLVRRDALLILDLGLHVVDGVRRLHLEGDRLPRESLHEDLHLAGGG*

Sequence

>CNT30591107
GGTGGCATCGTCGACCTTGTAGAACTGGAGCACGGCGAGCTTGACCTTCTTCTTCTTGTGCTTGATCTTCTTGGGCTTGGTGTAGGTCTTCTTCTTGCGC
TTCTTGGCGCCGCCGCGGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGACGACTCCACCT
CGAGGGTGATCGTCTTCCCCGTGAGAGTCTTCACGAAGATCTGCATCTTGCCGGCGGGGGGTAGCGGCCCACGGACGCGGCGCCGCTGACTTAAGTTACG
ACGGCC