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Detailed information on CNT3059064


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30220384Amborella trichopodaHordeum vulgare2.1521.9891.6760forward
CNT30596036Amborella trichopodaOryza meridionalis2.2623.4290.4863forward

Expression of CNT3059064

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MIYLDQKLRLSILTQGRPTISEIKDSVVVP*

>peptide 2 (76 aa)
MSKVLFPCRVLSSNLFESFTRKGSIEMQNSFRETRMPSVKHDLPRSKASTFNSNSRSPDYLRNKRLSGGSLMPKLV*

>peptide 3 (30 aa)
MVVDVVQPFKEAPVCLKSSWSESRSICWFY*

Sequence

>CNT3059064
GAAAAAGAGTTAGCCGCTGCTATTAAGGAGCGAATAAATAATAGCGCTAGCGCGCTCTTCCGTTAACAAAGCTCTCTAAGGCAAGGTCAACTCAACTAGT
CGCAAGAGAAAGACGGGTAATCCTGAGGGCAGCAGCAGACTAGTTAAGCACTTGCTGTGGGCAAAGCGCTAGTGTTTGTAAACTATGCTTCAAAGGCCTG
CTAAAGAAGGAGTGTACCCTAATCGACTACCACCTAACCAATGGCACGAGTAGGCGGATCAATATCCGGATGTAAGCTCTGGCCCAGCAGATAGATCTTC
TATACTAAATATAACATTGGCACAATAGCATGCCACTAAAAAAGAAAATTGCTGTTCAATCCGCGTACCGCAGTTGAAGGGTCTTCTCAATCTGGATAGA
AGAGTCATGGAAGTAATGAAAAAGACAAAGTTATGTTGACTGCTTGAACTGCTGTTGTGCAGTTAGGCGGCATTGGCGGAAGAGCTGTTTTTCCAGTTTG
TCGGTCCCCGATTATCAGTTCTCGTTGACCACGACCTATAGGAACCTTTATAGCCTTCCTTGATATGGCAATATGAAATCCATACTTTGACAAAACAAAA
CTTATTTAGTTAAACTTTCTTTTTGCTTTTTAAAACAAATTAAAGATAAGAGAATTGCCCCCGCTATACTTATTATTTTATTTAGAAAAGTCAAAATGAA
CTTTTCCAGCTATACTTTATAAGAAAGGAAGTAACTCAGAATTTGAAGTACAGTAAACATTATCACCTTGTTGCAGCTTGCAGCTTGCAGCCATAAAATC
AAAGAATACAGGCCACTCGGCCCATTGATAAAACATAATGAAAATGAGCGCTATAATATATTTGTTATAAAAGTACGAGATGCTACTCGGCAGAGGATTC
TCTTAAAGTAGCTGAAATGTAGGAACTGTATTCAAATCTTTTCTGGCTGCAACAGTTTGCTCTTTGCTCGTTCATTATATTTCGCTACCAAGATAAGATC
TATCTTTTTCTTACGTATAAAGAAAGTTTTATCTAGCGACGAACCTTATAGTGTTCGAACACGGTCAACGGAGCTCTTATTCAGCAACGCTAAGTGCTTT
TGACAGTTGTCTACCATGTTCCGTTTTCAAAATTCCTTTATTTCCACGGCATTCTCACAAAAGCAAAAAGTAGCGTAGCAAGGTAGGTTACTCTTTTTTA
TAGAAAAGGATCAGTTCTTCAGCTCTTTCCTGCTGGGTTTGACTAGGCAAGGGTGAGTCGGGCCTTCTCAATGTCGAAAGTTCTTTTTCCTTGTCGCGTT
CTTTCTTCAAATTTGTTTGAATCCTTTACGAGGAAGGGGAGCATTGAAATGCAGAACTCCTTCCGGGAAACCAGAATGCCAAGTGTCAAACATGATCTAC
CTCGATCAAAAGCTTCGACTTTCAATTCTAACTCAAGGTCGCCCGACTATCTCAGAAATAAAAGACTCAGTGGTGGTTCCTTGATGCCCAAGCTTGTGTA
GCCAACGAGCAAAGCCCCAGCGAGAGAAGTGCGTAAGCACGGAGCGAGCCTTTGAGCGAGAGAAGTGCGTAAGCACGGAACGAGAGAAGTGCTACAGCAC
GGAACGAGAGAAGTGCGTAAGCACGAAGCGAGCCTAAATGCGAGCCTAAATGCGAGCCAAAGAGTAAATGCGAGTGCTTTTCGGAAAAAGCGATTAGGTT
AGTGTCAAGCTAGTAGGCGTGCTCCGAGGGCATTAATTCGTATCAACCCGGAACGCTACTCCGCGAGGAATGAGTTGGGCACTGGGCTTAGGAGAAGCAG
TGCCTATCACCCACAGACGGACAGACGGAGGTAGTAAACCGGTCCTTGGGTGACTTGTTTAGATGCTTGGTGGGCAGGAAGCCCAGATCAAAATGGGAGG
AGATCCTACCTGCGGCTGAGTTTACTAAAAAGCAAAAGTATGCAGGTATATTCTCTTAGACTTTCTTTATAGTTTGAAAAACCGACACAGTAGTCGGGCT
TAGCTGATCTTGGGGGTAGACCATCTAAAAGGAATTGACTTTTTTTAAGAATCTTTCATGAGAATCCTAATTTGGTGCCCTCTGGCCTGCGAAAGCAATT
CTAAATAAGTAGTATACCGTATTTTTTTTTCTTTTTCTTTGACCTCCGACAGTCTTGCTTTACAGAAGTAATCCACTCTCTTTAGAAAGCGATTGATGGA
GGTGAGATAAAGACAGAAAGGCTAGGCAAGAGGGGAAGGAGATGAAAGTGAGGGCTTGAACTGAACTTTCGCAACGAAATCACATAACATAAGATTATTA
GGACTTTTGAATGCCTGCCCTAAAGCTGCTTACGGAGAAAAATGACGATTTGGCTCGGGAAGAGAGCTTATGCCTTCAGCCTCTTTAGACCCCGATATGC
CTTATTAAGTTAAGCTATTTCATGATCCCTTGATAGGATAGAAAGATTCTTCTTTCTGCTAACTCGCGAATCTTACACGAGCCTCCTCTTTTCGTGAATT
GTAGTTTGCATGCCCGACCTTTCTCTTTAGCTCTTCTAGAGATGGTAGTGGACGTGGTTCAGCCCTTTAAGGAAGCTCCAGTCTGCCTAAAATCCTCTTG
GAGTGAGTCAAGATCCATCTGCTGGTTCTACTAGTTCCCCACCAGGAGCTCTTCTTTCTTTTTTATAGGAAATTGGAAAGCAAGATCTCTTTTCAGGGGA
AGTTCCGATCGGGCTATTGCTCAAGAAAAGGAAGCGAGCTAACTCGACTGGGAAAGGAAAGAAGAGGGACTTTACTCACGATACCAG